RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	RPL1B	P0CX44	217 aa	Known RBP	5.24	□□□□□ -1.57
SIR2	YDL042C	YUR1	P26725	428 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	SEC28	P40509	296 aa	Known RBP	5.24	□□□□□ -1.57
SIR2	YDL042C	PHB2	P50085	310 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	IBD2	P53892	351 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	PRP42	Q03776	544 aa	Known RBP	5.24	□□□□□ -1.57
SIR2	YDL042C	KRE9	P39005	276 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	GOR1	P53839	350 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	HNT3	Q08702	217 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	RAD61	Q99359	647 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	RRP7	P25368	297 aa	Predicted RBP	5.23	□□□□□ -1.57
SIR2	YDL042C	RIB5	P38145	238 aa		5.23	□□□□□ -1.57
SIR2	YDL042C	OLA1	P38219	394 aa	Known RBP	5.23	□□□□□ -1.57
SIR2	YDL042C	RXT2	P38255	430 aa		5.23	□□□□□ -1.57
SIR2	YDL042C	YBP1	P38315	674 aa		5.23	□□□□□ -1.57
SIR2	YDL042C	GAT2	P40209	560 aa		5.23	□□□□□ -1.57
SIR2	YDL042C	YFL067W	P43537	175 aa		5.23	□□□□□ -1.57
SIR2	YDL042C	THP3	Q12049	470 aa	Known RBP	5.23	□□□□□ -1.57
SIR2	YDL042C	PDE2	P06776	526 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	RAD57	P25301	460 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	SWI3	P32591	825 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	MIX23	P38162	196 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	PCF11	P39081	626 aa	Predicted RBP	5.22	□□□□□ -1.57
SIR2	YDL042C	OST1	P41543	476 aa	Known RBP	5.22	□□□□□ -1.57
SIR2	YDL042C	PIB2	P53191	635 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	PEX25	Q02969	394 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	ATG34	Q12292	412 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	RRP12	Q12754	1228 aa	Known RBP	5.22	□□□□□ -1.57
SIR2	YDL042C	YCL021W-A	Q96VH3	125 aa		5.22	□□□□□ -1.57
SIR2	YDL042C	HEM15	P16622	393 aa		5.21	□□□□□ -1.57
SIR2	YDL042C	SPO12	P17123	173 aa		5.21	□□□□□ -1.57
SIR2	YDL042C	FAA2	P39518	744 aa		5.21	□□□□□ -1.57
SIR2	YDL042C	YPS6	P40583	537 aa		5.21	□□□□□ -1.57
SIR2	YDL042C	YMR181C	Q03231	154 aa		5.21	□□□□□ -1.57
SIR2	YDL042C	URH1	Q04179	340 aa		5.21	□□□□□ -1.57
SIR2	YDL042C	RTT103	Q05543	409 aa		5.21	□□□□□ -1.57
SIR2	YDL042C	PHO2	P07269	559 aa		5.21	□□□□□ -1.58
SIR2	YDL042C	SLY1	P22213	666 aa		5.21	□□□□□ -1.58
SIR2	YDL042C	SPS22	P25380	463 aa		5.21	□□□□□ -1.58
SIR2	YDL042C	TIF5	P38431	405 aa	Known RBP	5.21	□□□□□ -1.58
SIR2	YDL042C	STN1	P38960	494 aa		5.21	□□□□□ -1.58
SIR2	YDL042C	RHO5	P53879	331 aa	Known RBP	5.21	□□□□□ -1.58
SIR2	YDL042C	YDR341C	Q05506	607 aa	Known RBP	5.21	□□□□□ -1.58
SIR2	YDL042C	SNT309	Q06091	175 aa	Predicted RBP	5.21	□□□□□ -1.58
SIR2	YDL042C	RUP1	Q12242	671 aa		5.21	□□□□□ -1.58
SIR2	YDL042C	PSK1	P31374	1356 aa		5.2	□□□□□ -1.58
SIR2	YDL042C	ADE6	P38972	1358 aa	Known RBP	5.2	□□□□□ -1.58
SIR2	YDL042C	ALG1	P16661	449 aa		5.2	□□□□□ -1.58
SIR2	YDL042C	CYS4	P32582	507 aa	Known RBP	5.2	□□□□□ -1.58
SIR2	YDL042C	RRP5	Q05022	1729 aa	Known RBP	5.2	□□□□□ -1.58
SIR2	YDL042C	IMA3	P0CW40	589 aa		5.19	□□□□□ -1.58
SIR2	YDL042C	IMA4	P0CW41	589 aa		5.19	□□□□□ -1.58
SIR2	YDL042C	HSP104	P31539	908 aa	Known RBP	5.19	□□□□□ -1.58
SIR2	YDL042C	PUP2	P32379	260 aa		5.19	□□□□□ -1.58
SIR2	YDL042C	KKQ8	P36004	724 aa		5.19	□□□□□ -1.58
SIR2	YDL042C	IMA2	Q08295	589 aa		5.19	□□□□□ -1.58
SIR2	YDL042C	YLR108C	Q12259	485 aa		5.19	□□□□□ -1.58
SIR2	YDL042C	YLR419W	Q06698	1435 aa	Known RBP	5.19	□□□□□ -1.58
SIR2	YDL042C	YBR056W	P38081	501 aa		5.18	□□□□□ -1.58
SIR2	YDL042C	BRO1	P48582	844 aa		5.18	□□□□□ -1.58
SIR2	YDL042C	PPM1	Q04081	328 aa		5.18	□□□□□ -1.58
SIR2	YDL042C	SNX3	Q08826	162 aa	Known RBP	5.18	□□□□□ -1.58
SIR2	YDL042C	SRL2	Q12020	392 aa		5.18	□□□□□ -1.58
SIR2	YDL042C	APE4	P38821	490 aa		5.18	□□□□□ -1.58
SIR2	YDL042C	YHR218W	P38899	603 aa		5.18	□□□□□ -1.58
SIR2	YDL042C	YER079W	P40052	210 aa	Known RBP	5.18	□□□□□ -1.58
SIR2	YDL042C	HXT11	P54862	567 aa		5.18	□□□□□ -1.58
SIR2	YDL042C	YTH1	Q06102	208 aa	Predicted RBP	5.18	□□□□□ -1.58
SIR2	YDL042C	CDC21	P06785	304 aa		5.17	□□□□□ -1.58
SIR2	YDL042C	RGT1	P32862	1170 aa		5.17	□□□□□ -1.58
SIR2	YDL042C	AZR1	P50080	613 aa		5.17	□□□□□ -1.58
SIR2	YDL042C	ROG1	P53118	685 aa		5.17	□□□□□ -1.58
SIR2	YDL042C	MMT1	Q03218	510 aa		5.17	□□□□□ -1.58
SIR2	YDL042C	RRP9	Q06506	573 aa	Known RBP	5.17	□□□□□ -1.58
SIR2	YDL042C	YER078W-A	Q3E7A2	54 aa		5.17	□□□□□ -1.58
SIR2	YDL042C	TY4B-H	P0C2J7	1802 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	TY4B-J	P47024	1803 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	PHO91	P27514	894 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	PFF1	P38244	976 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	MTC6	P38849	526 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	GPI16	P38875	610 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	YIL067C	P40514	678 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	STD1	Q02794	444 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	ESA1	Q08649	445 aa		5.16	□□□□□ -1.58
SIR2	YDL042C	DST1	P07273	309 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	NAT1	P12945	854 aa	Known RBP	5.15	□□□□□ -1.58
SIR2	YDL042C	CPR3	P25719	182 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	DPH2	P32461	534 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	INM1	P38710	295 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	WWM1	P43582	211 aa	Known RBP	5.15	□□□□□ -1.58
SIR2	YDL042C	NCA3	P46955	337 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	NDL1	Q06568	189 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	NSE1	Q07913	336 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	YRF1-2	P40105	1681 aa		5.15	□□□□□ -1.58
SIR2	YDL042C	CPR4	P25334	318 aa		5.15	□□□□□ -1.59
SIR2	YDL042C	YBR137W	P38276	179 aa		5.15	□□□□□ -1.59
SIR2	YDL042C	MLC1	P53141	149 aa		5.15	□□□□□ -1.59
SIR2	YDL042C	IMP4	P53941	290 aa	Known RBP	5.15	□□□□□ -1.59
SIR2	YDL042C	RRN11	Q04712	507 aa		5.15	□□□□□ -1.59
SIR2	YDL042C	NFT1	P0CE68	1218 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms