RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C YNR048WP53740 393 aa4.04□□□□□ -1.76
NPL4YBR170C ARK1P53974 638 aa4.04□□□□□ -1.76
NPL4YBR170C LDS2Q08218 356 aa4.04□□□□□ -1.76
NPL4YBR170C CEX1Q12453 761 aa4.04□□□□□ -1.76
NPL4YBR170C SPO24Q3E752 67 aa4.04□□□□□ -1.76
NPL4YBR170C ARG4P04076 463 aaPredicted RBP4.03□□□□□ -1.76
NPL4YBR170C RPS16AP0CX51 143 aaKnown RBP4.03□□□□□ -1.76
NPL4YBR170C RPS16BP0CX52 143 aaKnown RBP4.03□□□□□ -1.76
NPL4YBR170C ARF1P11076 181 aaKnown RBP4.03□□□□□ -1.76
NPL4YBR170C MDM10P18409 493 aa4.03□□□□□ -1.76
NPL4YBR170C YUH1P35127 236 aa4.03□□□□□ -1.76
NPL4YBR170C YBR056WP38081 501 aa4.03□□□□□ -1.76
NPL4YBR170C PRP39P39682 629 aaKnown RBP4.03□□□□□ -1.76
NPL4YBR170C LCP5P40079 357 aaPredicted RBP4.03□□□□□ -1.76
NPL4YBR170C GWT1P47026 490 aa4.03□□□□□ -1.76
NPL4YBR170C DBP6P53734 629 aaKnown RBP4.03□□□□□ -1.76
NPL4YBR170C ODC1Q03028 310 aa4.03□□□□□ -1.76
NPL4YBR170C SPO19Q03029 223 aa4.03□□□□□ -1.76
NPL4YBR170C VAC14Q06708 880 aa4.03□□□□□ -1.76
NPL4YBR170C ASA1Q06822 443 aa4.03□□□□□ -1.76
NPL4YBR170C YEH2Q07950 538 aa4.03□□□□□ -1.76
NPL4YBR170C GLE1Q12315 538 aa4.03□□□□□ -1.76
NPL4YBR170C FSH3Q99369 266 aa4.03□□□□□ -1.76
NPL4YBR170C UGA1P17649 471 aa4.02□□□□□ -1.77
NPL4YBR170C ITR1P30605 584 aa4.02□□□□□ -1.77
NPL4YBR170C SIP2P34164 415 aaKnown RBP4.02□□□□□ -1.77
NPL4YBR170C DOA1P36037 715 aa4.02□□□□□ -1.77
NPL4YBR170C YJL070CP40361 888 aa4.02□□□□□ -1.77
NPL4YBR170C ATM1P40416 690 aa4.02□□□□□ -1.77
NPL4YBR170C AZF1P41696 914 aa4.02□□□□□ -1.77
NPL4YBR170C SHE10P53075 577 aa4.02□□□□□ -1.77
NPL4YBR170C YPL068CQ02749 293 aa4.02□□□□□ -1.77
NPL4YBR170C BET5Q03630 159 aa4.02□□□□□ -1.77
NPL4YBR170C AIM33Q04516 312 aa4.02□□□□□ -1.77
NPL4YBR170C YMR254CQ04838 102 aa4.02□□□□□ -1.77
NPL4YBR170C RRT8Q08219 342 aa4.02□□□□□ -1.77
NPL4YBR170C YDR262WQ12331 272 aa4.02□□□□□ -1.77
NPL4YBR170C YNL162W-AQ3E7A8 72 aa4.02□□□□□ -1.77
NPL4YBR170C TOA2P32774 122 aa4.01□□□□□ -1.77
NPL4YBR170C SMC2P38989 1170 aaKnown RBP4.01□□□□□ -1.77
NPL4YBR170C SIM1P40472 476 aa4.01□□□□□ -1.77
NPL4YBR170C ERV41Q04651 352 aa4.01□□□□□ -1.77
NPL4YBR170C RNH1Q04740 348 aa4.01□□□□□ -1.77
NPL4YBR170C YMR034CQ05131 434 aaPredicted RBP4.01□□□□□ -1.77
NPL4YBR170C RRG8Q06109 277 aa4.01□□□□□ -1.77
NPL4YBR170C TEF1P02994 458 aaKnown RBP4.01□□□□□ -1.77
NPL4YBR170C HEM2P05373 342 aa4.01□□□□□ -1.77
NPL4YBR170C YCP4P25349 247 aaKnown RBP4.01□□□□□ -1.77
NPL4YBR170C TIP1P27654 210 aaPredicted RBP4.01□□□□□ -1.77
NPL4YBR170C YPS1P32329 569 aa4.01□□□□□ -1.77
NPL4YBR170C IME2P32581 645 aa4.01□□□□□ -1.77
NPL4YBR170C YKL070WP36087 169 aa4.01□□□□□ -1.77
NPL4YBR170C RRP3P38712 501 aaKnown RBP4.01□□□□□ -1.77
NPL4YBR170C DHH1P39517 506 aaKnown RBP4.01□□□□□ -1.77
NPL4YBR170C LYS12P40495 371 aaKnown RBP4.01□□□□□ -1.77
NPL4YBR170C YDL186WP48568 277 aa4.01□□□□□ -1.77
NPL4YBR170C VOA1P53262 265 aa4.01□□□□□ -1.77
NPL4YBR170C YGR266WP53326 701 aa4.01□□□□□ -1.77
NPL4YBR170C MRPL35Q06678 367 aa4.01□□□□□ -1.77
NPL4YBR170C TIM18Q08749 192 aa4.01□□□□□ -1.77
NPL4YBR170C STE2D6VTK4 431 aa4□□□□□ -1.77
NPL4YBR170C YLL053CP0CD98 152 aa4□□□□□ -1.77
NPL4YBR170C MAS2P11914 482 aa4□□□□□ -1.77
NPL4YBR170C YCR022CP25620 114 aa4□□□□□ -1.77
NPL4YBR170C COX13P32799 129 aa4□□□□□ -1.77
NPL4YBR170C BUD2P33314 1104 aa4□□□□□ -1.77
NPL4YBR170C RTC2P38279 296 aa4□□□□□ -1.77
NPL4YBR170C PEX18P38855 283 aa4□□□□□ -1.77
NPL4YBR170C HAT2P39984 401 aa4□□□□□ -1.77
NPL4YBR170C YIR014WP40570 242 aa4□□□□□ -1.77
NPL4YBR170C YGL185CP53100 379 aa4□□□□□ -1.77
NPL4YBR170C RRN9P53437 365 aa4□□□□□ -1.77
NPL4YBR170C YDR415CQ04033 374 aaPredicted RBP4□□□□□ -1.77
NPL4YBR170C DCP1Q12517 231 aaPredicted RBP4□□□□□ -1.77
NPL4YBR170C TPK3P05986 398 aa3.99□□□□□ -1.77
NPL4YBR170C ATP1P07251 545 aaKnown RBP3.99□□□□□ -1.77
NPL4YBR170C CLN3P13365 580 aa3.99□□□□□ -1.77
NPL4YBR170C MSS116P15424 664 aaKnown RBP3.99□□□□□ -1.77
NPL4YBR170C GLN3P18494 730 aa3.99□□□□□ -1.77
NPL4YBR170C CKI1P20485 582 aa3.99□□□□□ -1.77
NPL4YBR170C EFB1P32471 206 aaKnown RBP3.99□□□□□ -1.77
NPL4YBR170C GLC7P32598 312 aaKnown RBP3.99□□□□□ -1.77
NPL4YBR170C TMT1P32643 299 aa3.99□□□□□ -1.77
NPL4YBR170C LOS1P33418 1100 aaPredicted RBP3.99□□□□□ -1.77
NPL4YBR170C BZZ1P38822 633 aa3.99□□□□□ -1.77
NPL4YBR170C CDC40P40968 455 aaPredicted RBP3.99□□□□□ -1.77
NPL4YBR170C PSA1P41940 361 aaKnown RBP3.99□□□□□ -1.77
NPL4YBR170C LAM5P43560 674 aa3.99□□□□□ -1.77
NPL4YBR170C RRT5P43607 289 aa3.99□□□□□ -1.77
NPL4YBR170C TOS3P43637 560 aa3.99□□□□□ -1.77
NPL4YBR170C GTO1P48239 356 aa3.99□□□□□ -1.77
NPL4YBR170C AVT4P50944 713 aa3.99□□□□□ -1.77
NPL4YBR170C MRP51Q02950 344 aa3.99□□□□□ -1.77
NPL4YBR170C SMP3Q04174 516 aa3.99□□□□□ -1.77
NPL4YBR170C SEG1Q04279 960 aa3.99□□□□□ -1.77
NPL4YBR170C PAA1Q12447 191 aaKnown RBP3.99□□□□□ -1.77
NPL4YBR170C RPL18AP0CX49 186 aaKnown RBP3.98□□□□□ -1.77
NPL4YBR170C RPL18BP0CX50 186 aaKnown RBP3.98□□□□□ -1.77
NPL4YBR170C YFL068WP0CX99 160 aa3.98□□□□□ -1.77
NPL4YBR170C YLL066W-AP0CY00 160 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms