RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C YOS9Q99220 542 aa6.32□□□□□ -1.4
LDB7YBL006C RAP1P11938 827 aa6.31□□□□□ -1.4
LDB7YBL006C BAR1P12630 587 aa6.31□□□□□ -1.4
LDB7YBL006C ATG15P25641 520 aa6.31□□□□□ -1.4
LDB7YBL006C LHS1P36016 881 aa6.31□□□□□ -1.4
LDB7YBL006C HSM3P38348 480 aa6.31□□□□□ -1.4
LDB7YBL006C APE4P38821 490 aa6.31□□□□□ -1.4
LDB7YBL006C LYS12P40495 371 aaKnown RBP6.31□□□□□ -1.4
LDB7YBL006C SHR5P41912 237 aa6.31□□□□□ -1.4
LDB7YBL006C BNA3P47039 444 aaKnown RBP6.31□□□□□ -1.4
LDB7YBL006C UBC9P50623 157 aaPredicted RBP6.31□□□□□ -1.4
LDB7YBL006C IMA1P53051 589 aa6.31□□□□□ -1.4
LDB7YBL006C RNH70P53331 553 aa6.31□□□□□ -1.4
LDB7YBL006C YSA1Q01976 231 aa6.31□□□□□ -1.4
LDB7YBL006C ATP25Q03153 612 aa6.31□□□□□ -1.4
LDB7YBL006C PLM2Q04383 521 aa6.31□□□□□ -1.4
LDB7YBL006C YHC1Q05900 231 aaKnown RBP6.31□□□□□ -1.4
LDB7YBL006C YLR036CQ07986 203 aa6.31□□□□□ -1.4
LDB7YBL006C SGT1Q08446 395 aa6.31□□□□□ -1.4
LDB7YBL006C SNF8Q12483 233 aa6.31□□□□□ -1.4
LDB7YBL006C PSF1Q12488 208 aa6.31□□□□□ -1.4
LDB7YBL006C YKL068W-AQ3E826 78 aa6.31□□□□□ -1.4
LDB7YBL006C MDM12Q92328 271 aa6.31□□□□□ -1.4
LDB7YBL006C TAD3Q9URQ3 322 aa6.31□□□□□ -1.4
LDB7YBL006C FLO9P39712 1322 aa6.3□□□□□ -1.4
LDB7YBL006C PHO81P17442 1178 aa6.3□□□□□ -1.4
LDB7YBL006C ERG8P24521 451 aa6.3□□□□□ -1.4
LDB7YBL006C RVS161P25343 265 aaKnown RBP6.3□□□□□ -1.4
LDB7YBL006C PHO91P27514 894 aa6.3□□□□□ -1.4
LDB7YBL006C RPC19P28000 142 aaKnown RBP6.3□□□□□ -1.4
LDB7YBL006C HRB1P38922 454 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
LDB7YBL006C VPS41P38959 992 aa6.3□□□□□ -1.4
LDB7YBL006C FAA2P39518 744 aa6.3□□□□□ -1.4
LDB7YBL006C GAB1P41733 394 aa6.3□□□□□ -1.4
LDB7YBL006C TDA10P42938 290 aa6.3□□□□□ -1.4
LDB7YBL006C RPS12P48589 143 aaKnown RBP6.3□□□□□ -1.4
LDB7YBL006C PFA5Q03289 374 aa6.3□□□□□ -1.4
LDB7YBL006C YLR446WQ06204 433 aa6.3□□□□□ -1.4
LDB7YBL006C BAG7Q12128 409 aa6.3□□□□□ -1.4
LDB7YBL006C COX17Q12287 69 aa6.3□□□□□ -1.4
LDB7YBL006C PBS2P08018 668 aa6.29□□□□□ -1.4
LDB7YBL006C SAC7P17121 654 aa6.29□□□□□ -1.4
LDB7YBL006C NPP1P25353 742 aa6.29□□□□□ -1.4
LDB7YBL006C YCL049CP25577 312 aa6.29□□□□□ -1.4
LDB7YBL006C PBN1P25580 416 aa6.29□□□□□ -1.4
LDB7YBL006C HSP150P32478 413 aa6.29□□□□□ -1.4
LDB7YBL006C PGU1P47180 361 aa6.29□□□□□ -1.4
LDB7YBL006C YMR010WQ03687 405 aa6.29□□□□□ -1.4
LDB7YBL006C MIX14Q04341 121 aa6.29□□□□□ -1.4
LDB7YBL006C PAL1Q05518 499 aaKnown RBP6.29□□□□□ -1.4
LDB7YBL006C YLR352WQ06479 807 aa6.29□□□□□ -1.4
LDB7YBL006C YOL131WQ08270 108 aa6.29□□□□□ -1.4
LDB7YBL006C NOP58Q12499 511 aaKnown RBP6.29□□□□□ -1.4
LDB7YBL006C MTR10Q99189 972 aa6.29□□□□□ -1.4
LDB7YBL006C YFR010W-AP0C5N0 62 aa6.28□□□□□ -1.4
LDB7YBL006C DAT1P13483 248 aaKnown RBP6.28□□□□□ -1.4
LDB7YBL006C ERD1P16151 362 aa6.28□□□□□ -1.4
LDB7YBL006C ATS1P31386 333 aa6.28□□□□□ -1.4
LDB7YBL006C ANS1P38832 159 aa6.28□□□□□ -1.4
LDB7YBL006C YHR177WP38867 453 aa6.28□□□□□ -1.4
LDB7YBL006C AST2P39945 430 aaKnown RBP6.28□□□□□ -1.4
LDB7YBL006C YJL068CP40363 299 aa6.28□□□□□ -1.4
LDB7YBL006C RIC1P40395 1056 aa6.28□□□□□ -1.4
LDB7YBL006C YIL169CP40442 995 aa6.28□□□□□ -1.4
LDB7YBL006C QDR2P40474 542 aa6.28□□□□□ -1.4
LDB7YBL006C MRPS18P42847 217 aa6.28□□□□□ -1.4
LDB7YBL006C PAC10P48363 199 aa6.28□□□□□ -1.4
LDB7YBL006C YGR079WP53249 370 aa6.28□□□□□ -1.4
LDB7YBL006C CUZ1P53899 274 aa6.28□□□□□ -1.4
LDB7YBL006C NCE101Q02820 53 aa6.28□□□□□ -1.4
LDB7YBL006C GIS1Q03833 894 aa6.28□□□□□ -1.4
LDB7YBL006C SHE9Q04172 456 aa6.28□□□□□ -1.4
LDB7YBL006C DCR2Q05924 578 aa6.28□□□□□ -1.4
LDB7YBL006C YPT6Q99260 215 aa6.28□□□□□ -1.4
LDB7YBL006C FLP1P03870 423 aa6.27□□□□□ -1.41
LDB7YBL006C ARF1P11076 181 aaKnown RBP6.27□□□□□ -1.41
LDB7YBL006C YCL042WP25572 119 aa6.27□□□□□ -1.41
LDB7YBL006C CWH43P25618 953 aa6.27□□□□□ -1.41
LDB7YBL006C ERG9P29704 444 aa6.27□□□□□ -1.41
LDB7YBL006C NUP2P32499 720 aa6.27□□□□□ -1.41
LDB7YBL006C SIP2P34164 415 aaKnown RBP6.27□□□□□ -1.41
LDB7YBL006C YOR062CP36025 268 aa6.27□□□□□ -1.41
LDB7YBL006C TPO5P36029 618 aa6.27□□□□□ -1.41
LDB7YBL006C MRPL17P36528 281 aa6.27□□□□□ -1.41
LDB7YBL006C SOK1P40317 901 aa6.27□□□□□ -1.41
LDB7YBL006C JEM1P40358 645 aa6.27□□□□□ -1.41
LDB7YBL006C AAD10P47182 288 aa6.27□□□□□ -1.41
LDB7YBL006C RNR4P49723 345 aaKnown RBP6.27□□□□□ -1.41
LDB7YBL006C KEL2P50090 882 aa6.27□□□□□ -1.41
LDB7YBL006C ALG12P53730 551 aa6.27□□□□□ -1.41
LDB7YBL006C SWP1Q02795 286 aa6.27□□□□□ -1.41
LDB7YBL006C YDR541CQ03049 344 aa6.27□□□□□ -1.41
LDB7YBL006C ERB1Q04660 807 aaKnown RBP6.27□□□□□ -1.41
LDB7YBL006C GAS2Q06135 555 aa6.27□□□□□ -1.41
LDB7YBL006C RRG7Q08774 242 aaPredicted RBP6.27□□□□□ -1.41
LDB7YBL006C Q0144Q9ZZW2 109 aa6.27□□□□□ -1.41
LDB7YBL006C TY4B-PA0A0B7P3V8 1104 aa6.26□□□□□ -1.41
LDB7YBL006C GPH1P06738 902 aaKnown RBP6.26□□□□□ -1.41
LDB7YBL006C ADE5,7P07244 802 aaKnown RBP6.26□□□□□ -1.41
LDB7YBL006C KGD1P20967 1014 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms