RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 CKMP06732 381 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 IFNGR1P15260 489 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 DNM2P50570 870 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 BRD3Q15059 726 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 MAGEB6Q8N7X4 407 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 C2orf69Q8N8R5 385 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 CXorf38Q8TB03 319 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 CHTF18Q8WVB6 975 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 SLC12A9Q9BXP2 914 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 SIRT5Q9NXA8 310 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 TMEFF2Q9UIK5 374 aaPredicted RBP8.28□□□□□ -1.08
RFC1-217ENST00000639695 TCFL5Q9UL49 500 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 ZNF652Q9Y2D9 606 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 WASHC2AQ641Q2 1341 aa8.28□□□□□ -1.08
RFC1-217ENST00000639695 HRKO00198 91 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 N4BP3O15049 544 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 CFBP00751 764 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 SOD2P04179 222 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 GSTM1P09488 218 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 ATP2A2P16615 1042 aaKnown RBP8.27□□□□□ -1.09
RFC1-217ENST00000639695 ENDOUP21128 410 aaKnown RBP8.27□□□□□ -1.09
RFC1-217ENST00000639695 PCBP3P57721 371 aaKnown RBP8.27□□□□□ -1.09
RFC1-217ENST00000639695 YBX1P67809 324 aaKnown RBP8.27□□□□□ -1.09
RFC1-217ENST00000639695 SLC14A2Q15849 920 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 ABCB5Q2M3G0 1257 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 KSR2Q6VAB6 950 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 C16orf59Q7L2K0 433 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 CCDC103Q8IW40 242 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 FUBP3Q96I24 572 aaKnown RBP eCLIP8.27□□□□□ -1.09
RFC1-217ENST00000639695 MMP19Q99542 508 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 RHOBTB2Q9BYZ6 727 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 SLC13A1Q9BZW2 595 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 SPTLC3Q9NUV7 552 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 ANKRD6Q9Y2G4 727 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 PCDHA2Q9Y5H9 948 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 MRFAP1Q9Y605 127 aa8.27□□□□□ -1.09
RFC1-217ENST00000639695 CCDC66A2RUB6 948 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 WNT9AO14904 365 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 MSCO60682 206 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 KIR2DL1P43626 348 aaPredicted RBP8.26□□□□□ -1.09
RFC1-217ENST00000639695 KIR2DL2P43627 348 aaPredicted RBP8.26□□□□□ -1.09
RFC1-217ENST00000639695 RBM10P98175 930 aaKnown RBP8.26□□□□□ -1.09
RFC1-217ENST00000639695 KLF1Q13351 362 aaPredicted RBP8.26□□□□□ -1.09
RFC1-217ENST00000639695 CRY1Q16526 586 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 GGNQ86UU5 652 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 ZDHHC14Q8IZN3 488 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 RCBTB1Q8NDN9 531 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 CHAMP1Q96JM3 812 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 CATSPERZQ9NTU4 200 aa8.26□□□□□ -1.09
RFC1-217ENST00000639695 ARNTLO00327 626 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 SYPP08247 313 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 LCP1P13796 627 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 PNLIPP16233 465 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 RECQLP46063 649 aaPredicted RBP8.25□□□□□ -1.09
RFC1-217ENST00000639695 CEBPAP49715 358 aaPredicted RBP8.25□□□□□ -1.09
RFC1-217ENST00000639695 MECP2P51608 486 aaKnown RBP8.25□□□□□ -1.09
RFC1-217ENST00000639695 DDB1Q16531 1140 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 OVCH1Q7RTY7 1134 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 PNMA8AQ86V59 439 aaPredicted RBP8.25□□□□□ -1.09
RFC1-217ENST00000639695 SAMD3Q8N6K7 520 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 IPPKQ9H8X2 491 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 TCF7L1Q9HCS4 588 aa8.25□□□□□ -1.09
RFC1-217ENST00000639695 PNMA8BQ9ULN7 279 aaPredicted RBP8.25□□□□□ -1.09
RFC1-217ENST00000639695 SASH1O94885 1247 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 ZNF205O95201 554 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 TBC1D8O95759 1140 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 GTF2A2P52657 109 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 ERVFRD-1P60508 538 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 LSAMPQ13449 338 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 MINDY4Q4G0A6 757 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 PGM2L1Q6PCE3 622 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 DGKHQ86XP1 1220 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 IGDCC3Q8IVU1 814 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 EFHBQ8N7U6 833 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 LINC00116Q8NCU8 138 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 ZNF526Q8TF50 670 aaPredicted RBP8.24□□□□□ -1.09
RFC1-217ENST00000639695 MPHOSPH6Q99547 160 aaKnown RBP8.24□□□□□ -1.09
RFC1-217ENST00000639695 ZNF700Q9H0M5 742 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 PRDM11Q9NQV5 511 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 KLHL14Q9P2G3 628 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 GIT1Q9Y2X7 761 aa8.24□□□□□ -1.09
RFC1-217ENST00000639695 TIMM13Q9Y5L4 95 aaPredicted RBP8.24□□□□□ -1.09
RFC1-217ENST00000639695 VCAM1P19320 739 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 GRK2P25098 689 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 GRK3P35626 688 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 RTP1P59025 263 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 ERVK-21P61565 698 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 TCIRG1Q13488 830 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 SYCP2LQ5T4T6 812 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 PRRT2Q7Z6L0 340 aaPredicted RBP8.23□□□□□ -1.09
RFC1-217ENST00000639695 FAM129CQ86XR2 697 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 CBARPQ8N350 705 aaPredicted RBP8.23□□□□□ -1.09
RFC1-217ENST00000639695 MZB1Q8WU39 189 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 FAXDC2Q96IV6 333 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 ADAM7Q9H2U9 754 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 OXSMQ9NWU1 459 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 RCAN3Q9UKA8 241 aa8.23□□□□□ -1.09
RFC1-217ENST00000639695 FADS2P1A8MWK0 482 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 H7C1D1 291 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms