RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 USP17L8P0C7I0 530 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 PPP4CP60510 307 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 PPP2R2AP63151 447 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 CALCRLQ16602 461 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 SLC10A5Q5PT55 438 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 PPP4R3CPQ6ZMV5 832 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 TMC4Q7Z404 712 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 SLFN11Q7Z7L1 901 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 REXO1Q8N1G1 1221 aaKnown RBP21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 DDX12PQ92771 950 aa21.48■■□□□ 1.03
CACNA1A-241ENST00000637475 HIBADHP31937 336 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 RDXP35241 583 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 XRCC4Q13426 336 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 ASIC2Q16515 512 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 ANKRD20A8PQ5CZ79 823 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 RNF187Q5TA31 235 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 TATDN2Q93075 761 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 SGSM3Q96HU1 749 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 CDK5RAP3Q96JB5 506 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 CNOT10Q9H9A5 744 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 INTUQ9ULD6 942 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 TTC7AQ9ULT0 858 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 SNED1Q8TER0 1413 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 MYH4Q9Y623 1939 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 PGRMC1O00264 195 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 PRKCIP41743 596 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 POLR2FP61218 127 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 SOGA3Q5TF21 947 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 TEX2Q8IWB9 1127 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 OSBPL7Q9BZF2 842 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 NLRC4Q9NPP4 1024 aa21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-241ENST00000637475 IRS2Q9Y4H2 1338 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 DNAJC8O75937 253 aaPredicted RBP21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 TSPY3P0CV98 308 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 TSPY8P0CW00 308 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 PRDX5P30044 214 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 NPEPPSP55786 919 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 KLHL30Q0D2K2 578 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 COASYQ13057 564 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 EDRF1Q3B7T1 1238 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 DPY19L2P1Q6NXN4 242 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 ANKRD2Q9GZV1 360 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 KDM4CQ9H3R0 1056 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 ZNF287Q9HBT7 754 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 TAF1P21675 1872 aa21.46■■□□□ 1.03
CACNA1A-241ENST00000637475 CDR1P51861 262 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 EIF3BP55884 814 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 ATP2B2Q01814 1243 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 BYSLQ13895 437 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 TRADDQ15628 312 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 FAM26FQ5R3K3 315 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 KRT79Q5XKE5 535 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 FUKQ8N0W3 1084 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 GPATCH11Q8N954 259 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 TLCD1Q96CP7 247 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 JPH2Q9BR39 696 aaPredicted RBP21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 TANGO6Q9C0B7 1094 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 MKNK2Q9HBH9 465 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 FBXL5Q9UKA1 691 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 STXBP5LQ9Y2K9 1186 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 PCDHA2Q9Y5H9 948 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 MYH7BA7E2Y1 1941 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 USP17L3A6NCW0 530 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 USP17L4A6NCW7 530 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 WTIPA6NIX2 430 aaPredicted RBP21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 RASA1P20936 1047 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 MRPL12P52815 198 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 TRAPPC3LQ5T215 181 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 USP17L1Q7RTZ2 530 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 SEC16BQ96JE7 1060 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 TXLNGYQ9BZA5 131 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 RIOX1Q9H6W3 641 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 FAM114A2Q9NRY5 505 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 SUCLA2Q9P2R7 463 aaPredicted RBP21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 SWAP70Q9UH65 585 aa21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.45■■□□□ 1.02
CACNA1A-241ENST00000637475 CNTNAP4Q9C0A0 1308 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 EDIL3O43854 480 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 YBX3P16989 372 aaKnown RBP eCLIP21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 CTNNA1P35221 906 aaKnown RBP21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 TXKP42681 527 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 HLTFQ14527 1009 aaKnown RBP eCLIP21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 SNCBQ16143 134 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 RC3H1Q5TC82 1133 aaKnown RBP21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 PPP1R18Q6NYC8 613 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 DYMQ7RTS9 669 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 IRF2BP2Q7Z5L9 587 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 PARP9Q8IXQ6 854 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 CACNA2D3Q8IZS8 1091 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 ZNF444Q8N0Y2 327 aaPredicted RBP21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 LEMD3Q9Y2U8 911 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 CD2APQ9Y5K6 639 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 CDK5RAP2Q96SN8 1893 aa21.44■■□□□ 1.02
CACNA1A-241ENST00000637475 TRAF5O00463 557 aa21.43■■□□□ 1.02
CACNA1A-241ENST00000637475 KCNK3O14649 394 aa21.43■■□□□ 1.02
CACNA1A-241ENST00000637475 SART1O43290 800 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-241ENST00000637475 NBPF9Q3BBW0 867 aa21.43■■□□□ 1.02
CACNA1A-241ENST00000637475 CYB5D1Q6P9G0 228 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms