RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 KCTD17Q8N5Z5 321 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 ANKRD13CQ8N6S4 541 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 SHCBP1Q8NEM2 672 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 INTS13Q9NVM9 706 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 NFASCO94856 1347 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 DNAJC25-GNG10A0A024R161 153 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 WDR64B1ANS9 1081 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 MAFGO15525 162 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 SERPINC1P01008 464 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 P4HBP07237 508 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 CCNE1P24864 410 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 JAK3P52333 1124 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 KCTD2Q14681 263 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 LRRC41Q15345 812 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 TPD52L1Q16890 204 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 GNPTABQ3T906 1256 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 HS1BP3Q53T59 392 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 RINT1Q6NUQ1 792 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 APTXQ7Z2E3 356 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 CCDC65Q8IXS2 484 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 P2RX5Q93086 422 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 DHTKD1Q96HY7 919 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 CDHR1Q96JP9 859 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 NAP1L5Q96NT1 182 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 MROH8Q9H579 483 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 TBC1D7Q9P0N9 293 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 ADD3Q9UEY8 706 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 SAMM50Q9Y512 469 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 PCDHA2Q9Y5H9 948 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 ARID2Q68CP9 1835 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 PTGS1P23219 599 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 SFNP31947 248 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 ICAM3P32942 547 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 UBASH3AP57075 661 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 SP2Q02086 613 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 SP4Q02446 784 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 PSMD2Q13200 908 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 PTPN21Q16825 1174 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 SEPT14Q6ZU15 432 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 SFR1Q86XK3 245 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 GPRC5AQ8NFJ5 357 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 SENP7Q9BQF6 1050 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 GTPBP4Q9BZE4 634 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 SEMA6BQ9H3T3 888 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 ZHX3Q9H4I2 956 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 ZSWIM4Q9H7M6 989 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 TCEAL9Q9UHQ7 104 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 PASKQ96RG2 1323 aa11.1□□□□□ -0.63
CACNA1A-216ENST00000635742 TMEM150BA6NC51 233 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 PPP1R2P41236 205 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 QARSP47897 775 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 HERC4Q5GLZ8 1057 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 CCDC186Q7Z3E2 898 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 GUF1Q8N442 669 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 PARK7Q99497 189 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 JPH1Q9HDC5 661 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 SLC9A2Q9UBY0 812 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 GOLGA6L6A8MZA4 724 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 CBFA2T2O43439 604 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 LYPLA2O95372 231 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 UBA1P22314 1058 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 GCLCP48506 637 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 ZNF157P51786 506 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 CASP5P51878 434 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 CENPPQ6IPU0 288 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 EEPD1Q7L9B9 569 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 SAPCD2Q86UD0 394 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 IRF2BP1Q8IU81 584 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 RDM1Q8NG50 284 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 KCNF1Q9H3M0 494 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 MYH11P35749 1972 aa11.09□□□□□ -0.63
CACNA1A-216ENST00000635742 BICDL2A1A5D9 508 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 ARHGEF35A5YM69 484 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 KCNJ18B7U540 433 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 IGF2BP3O00425 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 TBCAO75347 108 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 RARRES1P49788 294 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 ACTR2P61160 394 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 PSMC5P62195 406 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 CCNA1P78396 465 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 KCNJ12Q14500 433 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 KRT31Q15323 416 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 RGMBQ6NW40 437 aa11.08□□□□□ -0.64
CACNA1A-216ENST00000635742 TMC6Q7Z403 805 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms