RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ZNF286BP0CG31 522 aa16.6■□□□□ 0.25
PNKP-221ENST00000627317 PKP1Q13835 747 aa16.6■□□□□ 0.25
PNKP-221ENST00000627317 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
PNKP-221ENST00000627317 GJA10Q969M2 543 aa16.6■□□□□ 0.25
PNKP-221ENST00000627317 PCDHB6Q9Y5E3 794 aa16.6■□□□□ 0.25
PNKP-221ENST00000627317 CDH23Q9H251 3354 aa16.6■□□□□ 0.25
PNKP-221ENST00000627317 COL6A3P12111 3177 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 PPFIA4O75335 1185 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 OR52Z1P0C646 297 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 CYP2C9P11712 490 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 KRT76Q01546 638 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 PPIGQ13427 754 aaKnown RBP eCLIP16.59■□□□□ 0.252e-7■■■■□ 24
PNKP-221ENST00000627317 GPR20Q99678 358 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.59■□□□□ 0.253e-9■■■□□ 18.5
PNKP-221ENST00000627317 C16orf70Q9BSU1 422 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 TELO2Q9Y4R8 837 aa16.59■□□□□ 0.25
PNKP-221ENST00000627317 DHX15O43143 795 aaKnown RBP16.58■□□□□ 0.24
PNKP-221ENST00000627317 CHMP2AO43633 222 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 PSMD10O75832 226 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 BRD1O95696 1058 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 SUPT20HL2P0C7V6 817 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 HOXC8P31273 242 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 ACTR2P61160 394 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 TMEM240Q5SV17 173 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
PNKP-221ENST00000627317 ZNF746Q6NUN9 644 aaPredicted RBP16.58■□□□□ 0.24
PNKP-221ENST00000627317 FAM173BQ6P4H8 233 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 TMEM199Q8N511 208 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 SEPT1Q8WYJ6 367 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 HAS1Q92839 578 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 RNPC3Q96LT9 517 aaKnown RBP16.58■□□□□ 0.24
PNKP-221ENST00000627317 TMEM60Q9H2L4 133 aa16.58■□□□□ 0.24
PNKP-221ENST00000627317 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.58■□□□□ 0.24
PNKP-221ENST00000627317 WDR64B1ANS9 1081 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 PITPNM1O00562 1244 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 BMP15O95972 392 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 CCNE2O96020 404 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 TCF7P36402 384 aaPredicted RBP16.57■□□□□ 0.24
PNKP-221ENST00000627317 PSEN2P49810 448 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 PTGDRQ13258 359 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 HIC1Q14526 733 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 MFSD10Q14728 455 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 FAM47CQ5HY64 1035 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 UTP14CQ5TAP6 766 aaKnown RBP16.57■□□□□ 0.24
PNKP-221ENST00000627317 FAM109BQ6ICB4 259 aaPredicted RBP16.57■□□□□ 0.24
PNKP-221ENST00000627317 MIS18BP1Q6P0N0 1132 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 SMAP1Q8IYB5 467 aaPredicted RBP16.57■□□□□ 0.24
PNKP-221ENST00000627317 DHX38Q92620 1227 aaKnown RBP16.57■□□□□ 0.24
PNKP-221ENST00000627317 MTMR9Q96QG7 549 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 UNC45AQ9H3U1 944 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 IL23AQ9NPF7 189 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 GTF2IRD1Q9UHL9 959 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 CEP131Q9UPN4 1083 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 SAMM50Q9Y512 469 aa16.57■□□□□ 0.24
PNKP-221ENST00000627317 LAD1O00515 517 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 BACH1O14867 736 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 LGALS2P05162 132 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 TXKP42681 527 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 JAK3P52333 1124 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 CCL23P55773 120 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 NUCB2P80303 420 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 SMAD3P84022 425 aaKnown RBP16.56■□□□□ 0.24
PNKP-221ENST00000627317 RBL2Q08999 1139 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 TMEM266Q2M3C6 531 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 PSRC1Q6PGN9 363 aaPredicted RBP16.56■□□□□ 0.24
PNKP-221ENST00000627317 Q7L0L9 218 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 MIER3Q7Z3K6 550 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 ZNF396Q96N95 335 aaPredicted RBP16.56■□□□□ 0.24
PNKP-221ENST00000627317 KATNAL1Q9BW62 490 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
PNKP-221ENST00000627317 VAV3Q9UKW4 847 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 PCDHA12Q9UN75 941 aa16.56■□□□□ 0.24
PNKP-221ENST00000627317 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 TANC1Q9C0D5 1861 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 EMSYQ7Z589 1322 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 GSTTP1A0A1W2PQM5 241 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 PSAPP07602 524 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 ACRP10323 421 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 SFNP31947 248 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 PPP2R5CQ13362 524 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 SF3A1Q15459 793 aaKnown RBP16.55■□□□□ 0.24
PNKP-221ENST00000627317 PTGISQ16647 500 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 FOXD4L6Q3SYB3 417 aaPredicted RBP16.55■□□□□ 0.24
PNKP-221ENST00000627317 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 FOXD4L3Q6VB84 417 aaPredicted RBP16.55■□□□□ 0.24
PNKP-221ENST00000627317 ZNF365Q70YC5 407 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 RDM1Q8NG50 284 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 GLG1Q92896 1179 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 SCLYQ96I15 445 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 FTOQ9C0B1 505 aaKnown RBP eCLIP16.55■□□□□ 0.24
PNKP-221ENST00000627317 AZI2Q9H6S1 392 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 DISC1Q9NRI5 854 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 HDAC6Q9UBN7 1215 aa16.55■□□□□ 0.24
PNKP-221ENST00000627317 ZNF215Q9UL58 517 aaPredicted RBP16.55■□□□□ 0.24
PNKP-221ENST00000627317 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
PNKP-221ENST00000627317 DDIT3P35638 169 aa16.54■□□□□ 0.24
PNKP-221ENST00000627317 PRPHP41219 470 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms