RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 LLGL2Q6P1M3 1020 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 TRIM50Q86XT4 487 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 NPAS4Q8IUM7 802 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 IL31RAQ8NI17 732 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 LRRCC1Q9C099 1032 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 POMKQ9H5K3 350 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 TOMM22Q9NS69 142 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
SNX1-214ENST00000625244 CCDC171Q6TFL3 1326 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 FSD2A1L4K1 749 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 FSCN2O14926 492 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 CFBP00751 764 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 SRGAP2BP0DMP2 458 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 TGFB3P10600 412 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 NPR3P17342 541 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 AOC1P19801 751 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 VSIG10LQ86VR7 867 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 DTWD2Q8NBA8 298 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 TELO2Q9Y4R8 837 aa16.2■□□□□ 0.18
SNX1-214ENST00000625244 NOP56O00567 594 aaKnown RBP16.19■□□□□ 0.18
SNX1-214ENST00000625244 OPLAHO14841 1288 aa16.19■□□□□ 0.18
SNX1-214ENST00000625244 CD52P31358 61 aa16.19■□□□□ 0.18
SNX1-214ENST00000625244 TSHZ1Q6ZSZ6 1077 aa16.19■□□□□ 0.18
SNX1-214ENST00000625244 SEMA4AQ9H3S1 761 aa16.19■□□□□ 0.18
SNX1-214ENST00000625244 LIMD1Q9UGP4 676 aa16.19■□□□□ 0.18
SNX1-214ENST00000625244 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
SNX1-214ENST00000625244 PCDHB12Q9Y5F1 795 aa16.19■□□□□ 0.18
SNX1-214ENST00000625244 R4GN57 208 aa16.19■□□□□ 0.18
SNX1-214ENST00000625244 FGF18O76093 207 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
SNX1-214ENST00000625244 HSD17B4P51659 736 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 APOBRQ0VD83 1088 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 PGM5Q15124 567 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 QRICH1Q2TAL8 776 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 ZMYM1Q5SVZ6 1142 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 GPATCH4Q5T3I0 446 aaKnown RBP16.18■□□□□ 0.18
SNX1-214ENST00000625244 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 PLPP4Q5VZY2 271 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 ADGRF4Q8IZF3 695 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 DCLK2Q8N568 766 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 CYP2W1Q8TAV3 490 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 GPR20Q99678 358 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 ZBTB40Q9NUA8 1239 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 CDY2AQ9Y6F7 541 aa16.18■□□□□ 0.18
SNX1-214ENST00000625244 HIDE1A8MVS5 230 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 STAG3L1P0CL83 205 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 RSPO4Q2I0M5 234 aaPredicted RBP16.17■□□□□ 0.18
SNX1-214ENST00000625244 SPOUT1Q5T280 376 aaKnown RBP16.17■□□□□ 0.18
SNX1-214ENST00000625244 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
SNX1-214ENST00000625244 TAF2Q6P1X5 1199 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 STOX1Q6ZVD7 989 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 DNAJB3Q8WWF6 145 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 TTC14Q96N46 770 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 HINFPQ9BQA5 517 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 TMEM260Q9NX78 707 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 HCSTQ9UBK5 93 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 NRCAMQ92823 1304 aa16.17■□□□□ 0.18
SNX1-214ENST00000625244 ANKRD11Q6UB99 2663 aaPredicted RBP16.16■□□□□ 0.18
SNX1-214ENST00000625244 SCG2P13521 617 aa16.16■□□□□ 0.18
SNX1-214ENST00000625244 ST3GAL2Q16842 350 aa16.16■□□□□ 0.18
SNX1-214ENST00000625244 PDE12Q6L8Q7 609 aaKnown RBP16.16■□□□□ 0.18
SNX1-214ENST00000625244 CYFIP1Q7L576 1253 aa16.16■□□□□ 0.18
SNX1-214ENST00000625244 ZDHHC14Q8IZN3 488 aa16.16■□□□□ 0.18
SNX1-214ENST00000625244 NECTIN4Q96NY8 510 aa16.16■□□□□ 0.18
SNX1-214ENST00000625244 ADAM7Q9H2U9 754 aa16.16■□□□□ 0.18
SNX1-214ENST00000625244 ZNF215Q9UL58 517 aaPredicted RBP16.16■□□□□ 0.18
SNX1-214ENST00000625244 ASPMQ8IZT6 3477 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 WEE2P0C1S8 567 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 IBSPP21815 317 aaPredicted RBP16.15■□□□□ 0.18
SNX1-214ENST00000625244 HOXA13P31271 388 aaPredicted RBP16.15■□□□□ 0.18
SNX1-214ENST00000625244 GHRHRQ02643 423 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 CES5AQ6NT32 575 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 METTL7BQ6UX53 244 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 RSPH3Q86UC2 560 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 THNSL1Q8IYQ7 743 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 TCF25Q9BQ70 676 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 RTP3Q9BQQ7 232 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 FTHL17Q9BXU8 183 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
SNX1-214ENST00000625244 MRPS6P82932 125 aaKnown RBP16.14■□□□□ 0.17
SNX1-214ENST00000625244 HNRNPUQ00839 825 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX1-214ENST00000625244 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 TDRD5Q8NAT2 981 aaKnown RBP16.14■□□□□ 0.17
SNX1-214ENST00000625244 COLGALT1Q8NBJ5 622 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 ZBTB10Q96DT7 871 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 GPATCH3Q96I76 525 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 JMJD4Q9H9V9 463 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 ERVK-5Q9HDB9 667 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 AAASQ9NRG9 546 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 LRFN2Q9ULH4 789 aa16.14■□□□□ 0.17
SNX1-214ENST00000625244 PKD1L2Q7Z442 2459 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 CCND2P30279 289 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 ITIH3Q06033 890 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 PPFIA1Q13136 1202 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 SEMA3FQ13275 785 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 MARCH8Q5T0T0 291 aa16.13■□□□□ 0.17
SNX1-214ENST00000625244 RIN2Q8WYP3 895 aaPredicted RBP16.13■□□□□ 0.17
SNX1-214ENST00000625244 RUBCNQ92622 972 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms