RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 ACTR2P61160 394 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 SH3D19Q5HYK7 790 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 PLA2G4FQ68DD2 849 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 SAPCD2Q86UD0 394 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 NOC4LQ9BVI4 516 aaKnown RBP13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 NPHP3-ACAD11A0A0J9YXS1 232 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 LIG4P49917 911 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 NPEPPSP55786 919 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 MOXD1Q6UVY6 613 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 FNBP1Q96RU3 617 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 CEP89Q96ST8 783 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 HTRA3P83110 453 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 MAP3K10Q02779 954 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 GNASQ5JWF2 1037 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 FANCLQ9NW38 375 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 TAB2Q9NYJ8 693 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 PIK3CDO00329 1044 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 PRPF6O94906 941 aaKnown RBP13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 SP3Q02447 781 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 CCDC150Q8NCX0 1101 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 JPH2Q9BR39 696 aaPredicted RBP13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 KCNH4Q9UQ05 1017 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 STAM2O75886 525 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 PRAMEF19Q5SWL8 479 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 HPS3Q969F9 1004 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 ANKFY1Q9P2R3 1169 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 CLIC2O15247 247 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 RPA1P27694 616 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 TCF7P36402 384 aaPredicted RBP13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 BIRC3Q13489 604 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 FAM110CQ1W6H9 321 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 SFR1Q86XK3 245 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 RNF169Q8NCN4 708 aa13.81□□□□□ -0.2
SCAMP1-207ENST00000621999 Q4G0T1 1027 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 NLRP7Q8WX94 980 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 FAM167AQ96KS9 214 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 TXNRD2Q9NNW7 524 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 TUFT1Q9NNX1 390 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 NAV1Q8NEY1 1877 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 MED24O75448 989 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 TDRD12Q587J7 1177 aaKnown RBP13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 ZNF658Q5TYW1 1059 aaPredicted RBP13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 SPAG5Q96R06 1193 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 AGO4Q9HCK5 861 aaKnown RBP13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 COL4A5P29400 1685 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 MYL1P05976 194 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 GAP43P17677 238 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 TRIM17Q9Y577 477 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 EYA4O95677 639 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 ITGB5P18084 799 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 FANCCQ00597 558 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 PRKCEQ02156 737 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 PDE4CQ08493 712 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 ADAM9Q13443 819 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 ARMCX5Q6P1M9 558 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 MTMR8Q96EF0 704 aa13.8□□□□□ -0.2
SCAMP1-207ENST00000621999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.27e-6■■■■■ 74.5
SCAMP1-207ENST00000621999 ERLIN2O94905 339 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 MORC3Q14149 939 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 SMAP1Q8IYB5 467 aaPredicted RBP13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 C7orf31Q8N865 590 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 CLEC4DQ8WXI8 215 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 FAM184BQ9ULE4 1060 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 ARID5AQ03989 594 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 XKR3Q5GH77 459 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 UNC13DQ70J99 1090 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 PCIF1Q9H4Z3 704 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 RARBP10826 455 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 ADCYAP1R1P41586 468 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 CRHR2Q13324 411 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 LAMC2Q13753 1193 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 TFDP1Q14186 410 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 CST9Q5W186 159 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 TRIM9Q9C026 710 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 SMARCAD1Q9H4L7 1026 aa13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 COL2A1P02458 1487 aaPredicted RBP13.79□□□□□ -0.2
SCAMP1-207ENST00000621999 NID2Q14112 1375 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 K7ERI5 159 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 SLC16A4O15374 487 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms