RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 A0A1W2PPC1 479 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 BACH1O14867 736 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 MARCH6O60337 910 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 NEMFO60524 1076 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 MAGEA10P43363 369 aaPredicted RBP17.61■□□□□ 0.41
RPP40-207ENST00000618533 RBL2Q08999 1139 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 PTK7Q13308 1070 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 MFSD5Q6N075 450 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 NOC4LQ9BVI4 516 aaKnown RBP17.61■□□□□ 0.41
RPP40-207ENST00000618533 SAMM50Q9Y512 469 aa17.61■□□□□ 0.41
RPP40-207ENST00000618533 MAFBQ9Y5Q3 323 aaPredicted RBP17.61■□□□□ 0.41
RPP40-207ENST00000618533 RRN3P2A6NIE6 340 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 RPLP2P05387 115 aaKnown RBP17.6■□□□□ 0.41
RPP40-207ENST00000618533 PDIA4P13667 645 aaKnown RBP17.6■□□□□ 0.41
RPP40-207ENST00000618533 PPFIA1Q13136 1202 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 CALCRLQ16602 461 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 MIER3Q7Z3K6 550 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 CCDC60Q8IWA6 550 aaPredicted RBP17.6■□□□□ 0.41
RPP40-207ENST00000618533 TMEM199Q8N511 208 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 FAM167AQ96KS9 214 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 UNC45AQ9H3U1 944 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 RNPEPQ9H4A4 650 aa17.6■□□□□ 0.41
RPP40-207ENST00000618533 COL1A2P08123 1366 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 IGSF9BQ9UPX0 1349 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 KIF28PB7ZC32 967 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 HBP1O60381 514 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 CAND2O75155 1236 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 PARNO95453 639 aaKnown RBP17.59■□□□□ 0.41
RPP40-207ENST00000618533 ADAM17P78536 824 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 RILPL1Q5EBL4 403 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 MCTP1Q6DN14 999 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 SWSAP1Q6NVH7 229 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 PDXDC2PQ6P474 469 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 SERINC5Q86VE9 423 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 ATP8B4Q8TF62 1192 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 HAS1Q92839 578 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 BADQ92934 168 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 ATP6V0A1Q93050 837 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 PRO3102Q9H379 93 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 VAV3Q9UKW4 847 aa17.59■□□□□ 0.41
RPP40-207ENST00000618533 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 DKC1O60832 514 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPP40-207ENST00000618533 CYP2C9P11712 490 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 MARK3P27448 753 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 RFC2P35250 354 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 MDM2Q00987 491 aaPredicted RBP17.58■□□□□ 0.4
RPP40-207ENST00000618533 FPGSQ05932 587 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPP40-207ENST00000618533 PLCB4Q15147 1175 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 GRIK4Q16099 956 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 TAF2Q6P1X5 1199 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 RETREG2Q8NC44 543 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 LMBR1Q8WVP7 490 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.4
RPP40-207ENST00000618533 MTMR9Q96QG7 549 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 UIMC1Q96RL1 719 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 CTAGE1Q96RT6 745 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 PPP1R12CQ9BZL4 782 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 PCDHA12Q9UN75 941 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 CEP131Q9UPN4 1083 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 TRPC6Q9Y210 931 aa17.58■□□□□ 0.4
RPP40-207ENST00000618533 MBLAC1A4D2B0 266 aaPredicted RBP17.57■□□□□ 0.4
RPP40-207ENST00000618533 LAD1O00515 517 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 CHMP2AO43633 222 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
RPP40-207ENST00000618533 ITGB8P26012 769 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 MCM7P33993 719 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 ZNF484Q5JVG2 852 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 BRAPQ7Z569 592 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 PPP1R13LQ8WUF5 828 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
RPP40-207ENST00000618533 SETD4Q9NVD3 440 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 GABBR1Q9UBS5 961 aa17.57■□□□□ 0.4
RPP40-207ENST00000618533 PFKMP08237 780 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 INSRRP14616 1297 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 ATP2B1P20020 1258 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 CYP2C18P33260 490 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 EPHA7Q15375 998 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 RPAINQ86UA6 219 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 CKAP2LQ8IYA6 745 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 NEK9Q8TD19 979 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 GJA10Q969M2 543 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 TTC12Q9H892 705 aaPredicted RBP17.56■□□□□ 0.4
RPP40-207ENST00000618533 NRBP2Q9NSY0 501 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 TUBE1Q9UJT0 475 aa17.56■□□□□ 0.4
RPP40-207ENST00000618533 WNT7AO00755 349 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 TREHO43280 583 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 SELPP16109 830 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 SYT1P21579 422 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 SPIRE1Q08AE8 756 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 HIC1Q14526 733 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 RSPH3Q86UC2 560 aa17.55■□□□□ 0.4
RPP40-207ENST00000618533 RPUSD2Q8IZ73 545 aaKnown RBP17.55■□□□□ 0.4
RPP40-207ENST00000618533 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms