RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 TRIOO75962 3097 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 C5orf42Q9H799 3197 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 TTC36A6NLP5 189 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 ZBTB5O15062 677 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 LINC01565O15544 149 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 PPP1R11O60927 126 aaPredicted RBP9.83□□□□□ -0.84
GPC6-202ENST00000617456 CYP21A2P08686 494 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 TGFB3P10600 412 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 GHRP10912 638 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 ARHGAP4P98171 946 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 SP4Q02446 784 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
GPC6-202ENST00000617456 SMAD4Q13485 552 aaKnown RBP9.83□□□□□ -0.84
GPC6-202ENST00000617456 HERC4Q5GLZ8 1057 aaPredicted RBP9.83□□□□□ -0.84
GPC6-202ENST00000617456 STOX1Q6ZVD7 989 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 RALYLQ86SE5 291 aaKnown RBP9.83□□□□□ -0.84
GPC6-202ENST00000617456 TRIM50Q86XT4 487 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 STAG2Q8N3U4 1231 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 PRSS33Q8NF86 280 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 APBB2Q92870 758 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 SNX27Q96L92 541 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 LZTS2Q9BRK4 669 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 C11orf84Q9BUA3 381 aaPredicted RBP9.83□□□□□ -0.84
GPC6-202ENST00000617456 RIOX1Q9H6W3 641 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 GEMIN8Q9NWZ8 242 aaKnown RBP9.83□□□□□ -0.84
GPC6-202ENST00000617456 MAD2L2Q9UI95 211 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 CD207Q9UJ71 328 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 PCDHA1Q9Y5I3 950 aa9.83□□□□□ -0.84
GPC6-202ENST00000617456 CACNA1HO95180 2353 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 PTPRZ1P23471 2315 aaPredicted RBP9.82□□□□□ -0.84
GPC6-202ENST00000617456 TMEM221A6NGB7 291 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 KLRF2D3W0D1 207 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 E7EWF7 191 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 M0R296 226 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 CAND2O75155 1236 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 TBX10O75333 385 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 STAM2O75886 525 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 RB1P06400 928 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 GNAT1P11488 350 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 HOXC8P31273 242 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 NDUFV1P49821 464 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 TROAPQ12815 778 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 BTG3Q14201 252 aaPredicted RBP9.82□□□□□ -0.84
GPC6-202ENST00000617456 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 IER5LQ5T953 404 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 CYFIP1Q7L576 1253 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 HOMER1Q86YM7 354 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 EDAQ92838 391 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 PBXIP1Q96AQ6 731 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 GTPBP4Q9BZE4 634 aaKnown RBP9.82□□□□□ -0.84
GPC6-202ENST00000617456 LMAN2LQ9H0V9 348 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 ALG13Q9NP73 1137 aaKnown RBP9.82□□□□□ -0.84
GPC6-202ENST00000617456 TELO2Q9Y4R8 837 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 NLRC5Q86WI3 1866 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 MYH6P13533 1939 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 ADGRA3Q8IWK6 1321 aa9.82□□□□□ -0.84
GPC6-202ENST00000617456 ZFHX2Q9C0A1 2572 aaPredicted RBP9.81□□□□□ -0.84
GPC6-202ENST00000617456 PNMA6FA0A0J9YX94 578 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 C5orf67F2Z3F1 127 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 GCOM1H8Y6P7 765 aaPredicted RBP9.81□□□□□ -0.84
GPC6-202ENST00000617456 IFIT3O14879 490 aaKnown RBP9.81□□□□□ -0.84
GPC6-202ENST00000617456 CHRNA1P02708 482 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 LINC00271P0C7V0 271 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 POLR2MP0CAP2 368 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 KIF5BP33176 963 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 PTPN5P54829 565 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 GRM4Q14833 912 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 WTAPQ15007 396 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 FAM26DQ5JW98 314 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 RUFY4Q6ZNE9 571 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 TRIM67Q6ZTA4 783 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 CATIPQ7Z7H3 387 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 SUGP1Q8IWZ8 645 aaKnown RBP9.81□□□□□ -0.84
GPC6-202ENST00000617456 IGDCC4Q8TDY8 1250 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 LMBR1Q8WVP7 490 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 TMEM87BQ96K49 555 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 GPR20Q99678 358 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 USP26Q9BXU7 913 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 IL25Q9H293 177 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 RTEL1Q9NZ71 1219 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 RWDD3Q9Y3V2 267 aa9.81□□□□□ -0.84
GPC6-202ENST00000617456 BAZ2BQ9UIF8 2168 aaKnown RBP9.8□□□□□ -0.84
GPC6-202ENST00000617456 ENPP3O14638 875 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 MMP1P03956 469 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 CALM1P0DP23 149 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 CALM2P0DP24 149 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 CALM3P0DP25 149 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 IBSPP21815 317 aaPredicted RBP9.8□□□□□ -0.84
GPC6-202ENST00000617456 MCM5P33992 734 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 LIFRP42702 1097 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 GNAQP50148 359 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 PTH1RQ03431 593 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 SEMA3FQ13275 785 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 ADAM15Q13444 863 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 NEDD9Q14511 834 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 LPIN1Q14693 890 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 GNPTABQ3T906 1256 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 BMP2KLQ5H9B9 411 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 XRRA1Q6P2D8 792 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms