RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 CHGBP05060 677 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 EP400NLQ6ZTU2 488 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 TXNRD3Q86VQ6 643 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 JPH1Q9HDC5 661 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 RNF8O76064 485 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 ECE1P42892 770 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 KRT81Q14533 505 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 ERO1BQ86YB8 467 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 SLC4A9Q96Q91 983 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 LXNQ9BS40 222 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 FMN2Q9NZ56 1722 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 POTECB2RU33 542 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 MED7O43513 233 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 OSTNP61366 133 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 MICALCLQ6ZW33 695 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 FAM83AQ86UY5 434 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 KIF13AQ9H1H9 1805 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 E9PMD0 336 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 FKBP1AP62942 108 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 ATP2C1P98194 919 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 SCYL2Q6P3W7 929 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 INTS8Q75QN2 995 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 TRIM50Q86XT4 487 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 OR6J1Q8NGC5 347 aa10.28□□□□□ -0.76
CLTCL1-208ENST00000615606 CLDN3O15551 220 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 IFRD2Q12894 506 aaPredicted RBP10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 XRRA1Q6P2D8 792 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 ELMSAN1Q6PJG2 1045 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 DAAM2Q86T65 1068 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 SFR1Q86XK3 245 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 PHF20Q9BVI0 1012 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 IFT122Q9HBG6 1241 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 TUFT1Q9NNX1 390 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 ASIC3Q9UHC3 531 aa10.27□□□□□ -0.76
CLTCL1-208ENST00000615606 TBX3O15119 743 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 THAP12O43422 761 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 ARL1P40616 181 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 KIF11P52732 1056 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 ANTXR2P58335 489 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 RNASE9P60153 205 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 PDIA5Q14554 519 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 EIF2AK1Q9BQI3 630 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 HAUS4Q9H6D7 363 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 COBLO75128 1261 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 NR3C2P08235 984 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 NFIAQ12857 509 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 GPC2Q8N158 579 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 CCDC63Q8NA47 563 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 GCOM2Q9BZD3 368 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 GCNT4Q9P109 453 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 CALCOCO1Q9P1Z2 691 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 NXF1Q9UBU9 619 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 KNDC1Q76NI1 1749 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 SFI1A8K8P3 1242 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.773e-8■■■■■ 161.7
CLTCL1-208ENST00000615606 THNSL1Q8IYQ7 743 aa10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 GBA2Q9HCG7 927 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 SCAF8Q9UPN6 1271 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-208ENST00000615606 UBE2Q2LH0YL09 131 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 GUCY1A2P33402 732 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 STAT5BP51692 787 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 TWF2Q6IBS0 349 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 PROM2Q8N271 834 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 SLC26A4O43511 780 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 EVCP57679 992 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 CUL4BQ13620 913 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 PPP2R5EQ16537 467 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 DSTYKQ6XUX3 929 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 C11orf57Q6ZUT1 292 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 CCDC105Q8IYK2 499 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 HAUS1Q96CS2 278 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 TIPINQ9BVW5 301 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 KATNAL1Q9BW62 490 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 JMJD4Q9H9V9 463 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 POTEFA5A3E0 1075 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 MAFGO15525 162 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 GGPS1O95749 300 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 GH1P01241 217 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 ZNF568Q3ZCX4 644 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 POTEEQ6S8J3 1075 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 ARMCX2Q7L311 632 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 RSRC2Q7L4I2 434 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 IFT20Q8IY31 132 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 CCDC89Q8N998 374 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 XXYLT1Q8NBI6 393 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 NSRP1Q9H0G5 558 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 DENND3A2RUS2 1198 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms