RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 SHROOM1Q2M3G4 852 aaPredicted RBP11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 ZSCAN23Q3MJ62 389 aa11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 NCAPG2Q86XI2 1143 aa11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 BICD2Q8TD16 824 aa11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 FAM151AQ8WW52 585 aa11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 CLIC4Q9Y696 253 aa11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 FRMPD2Q68DX3 1309 aaPredicted RBP11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 OTOFQ9HC10 1997 aa11.27□□□□□ -0.61
CSNK1A1-209ENST00000606299 BTBD18B2RXH4 712 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 FZD9O00144 591 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 KRT2P35908 639 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 NOVP48745 357 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 PFKFB3Q16875 520 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 ABCB5Q2M3G0 1257 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 NBPF9Q3BBW0 867 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 TP53INP1Q96A56 240 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 ZBED3Q96IU2 234 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 PHF20Q9BVI0 1012 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 FOXP1Q9H334 677 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 CPVLQ9H3G5 476 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 RTEL1Q9NZ71 1219 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 RCOR1Q9UKL0 485 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
CSNK1A1-209ENST00000606299 PTPRFP10586 1907 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 GOLGA6L3A6NEY3 463 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 WNT10BO00744 389 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 PDHBP11177 359 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 U2AF2P26368 475 aaKnown RBP eCLIP11.25□□□□□ -0.611e-7■□□□□ 8
CSNK1A1-209ENST00000606299 NOS3P29474 1203 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 TNNI2P48788 182 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 NLRP5P59047 1200 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 ZNF280AP59817 542 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 SEPT2Q15019 361 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 SETDB1Q15047 1291 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 SF3A1Q15459 793 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 TBC1D10BQ4KMP7 808 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 ASPRV1Q53RT3 343 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 TATDN1Q6P1N9 297 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 TMEM179Q6ZVK1 233 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 NOSTRINQ8IVI9 506 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 CEP120Q8N960 986 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 PGBD1Q96JS3 809 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 PBX4Q9BYU1 374 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 TMEM39BQ9GZU3 492 aa11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 SCAF8Q9UPN6 1271 aaKnown RBP11.25□□□□□ -0.61
CSNK1A1-209ENST00000606299 SYCE3A1L190 88 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 FAM13AO94988 1023 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 YEATS4O95619 227 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 GH2P01242 217 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 LIG1P18858 919 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 LMNB1P20700 586 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 ME1P48163 572 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 MMP14P50281 582 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 ICA1Q05084 483 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 SLC35G1Q2M3R5 365 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 PHLDB3Q6NSJ2 640 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 RRP36Q96EU6 259 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 RASSF4Q9H2L5 321 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 KANSL2Q9H9L4 492 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 VAT1LQ9HCJ6 419 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 CABP5Q9NP86 173 aa11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 SEC63Q9UGP8 760 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-209ENST00000606299 SPTLC2O15270 562 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 CYTH3O43739 400 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 VEGFAP15692 232 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 ATP2B1P20020 1258 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 ZNF445P59923 1031 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 RRP1BQ14684 758 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 WWC2Q6AWC2 1192 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 CCAR1Q8IX12 1150 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 KCNG4Q8TDN1 519 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 DPF2Q92785 391 aa11.23□□□□□ -0.61
CSNK1A1-209ENST00000606299 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms