RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 LOXHD1Q8IVV2 1947 aa14.48□□□□□ -0.09
USE1-209ENST00000601592 TET1Q8NFU7 2136 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 WDR64B1ANS9 1081 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 TREHO43280 583 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 PSAPP07602 524 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 GJB2P29033 226 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 PTK7Q13308 1070 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 SHHQ15465 462 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 GRIK4Q16099 956 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 C9orf50Q5SZB4 431 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 SWSAP1Q6NVH7 229 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 PDXDC2PQ6P474 469 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 DEFB128Q7Z7B8 93 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 CCDC60Q8IWA6 550 aaPredicted RBP14.47□□□□□ -0.09
USE1-209ENST00000601592 CKAP2LQ8IYA6 745 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 SMAP1Q8IYB5 467 aaPredicted RBP14.47□□□□□ -0.09
USE1-209ENST00000601592 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 CAGE1Q8TC20 777 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 LMBR1Q8WVP7 490 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 DHX38Q92620 1227 aaKnown RBP14.47□□□□□ -0.09
USE1-209ENST00000601592 TNFRSF25Q93038 417 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 CTAGE1Q96RT6 745 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 RIT2Q99578 217 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 UNC45AQ9H3U1 944 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 ZNF302Q9NR11 478 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 PCDHA10Q9Y5I2 948 aa14.47□□□□□ -0.09
USE1-209ENST00000601592 RANBP2P49792 3224 aaKnown RBP14.47□□□□□ -0.09
USE1-209ENST00000601592 POTEB3A0JP26 581 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 ATG7O95352 703 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 THPOP40225 353 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 PLCB4Q15147 1175 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 PPP4R3AQ6IN85 833 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 POTEBQ6S5H4 581 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 MIER3Q7Z3K6 550 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 ETNPPLQ8TBG4 499 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 WNT8BQ93098 351 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 RNPC3Q96LT9 517 aaKnown RBP14.46□□□□□ -0.09
USE1-209ENST00000601592 MBOAT7Q96N66 472 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 IL23AQ9NPF7 189 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 DISC1Q9NRI5 854 aa14.46□□□□□ -0.09
USE1-209ENST00000601592 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.46□□□□□ -0.09
USE1-209ENST00000601592 NRCAMQ92823 1304 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 H3BQV1 296 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 PSMD10O75832 226 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 CTSHP09668 335 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 IQCF3P0C7M6 154 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 CKBP12277 381 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 INSRRP14616 1297 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 JAK3P52333 1124 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 MCTP1Q6DN14 999 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 PSRC1Q6PGN9 363 aaPredicted RBP14.45□□□□□ -0.1
USE1-209ENST00000601592 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 PLPPR4Q7Z2D5 763 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 SERINC5Q86VE9 423 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 AFAP1L1Q8TED9 768 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 GBF1Q92538 1859 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 TNPO1Q92973 898 aaKnown RBP14.45□□□□□ -0.1
USE1-209ENST00000601592 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.45□□□□□ -0.1
USE1-209ENST00000601592 FOXP1Q9H334 677 aaPredicted RBP14.45□□□□□ -0.1
USE1-209ENST00000601592 GABBR1Q9UBS5 961 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 TUBE1Q9UJT0 475 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 SIP14410 1827 aa14.45□□□□□ -0.1
USE1-209ENST00000601592 IGKV6D-21A0A0A0MT36 114 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 NEMFO60524 1076 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 BAG4O95429 457 aaKnown RBP14.44□□□□□ -0.1
USE1-209ENST00000601592 SELPP16109 830 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 HOXC8P31273 242 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 SFNP31947 248 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 SLC26A2P50443 739 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 TMEM240Q5SV17 173 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 ZNF365Q70YC5 407 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 RPUSD2Q8IZ73 545 aaKnown RBP14.44□□□□□ -0.1
USE1-209ENST00000601592 TRAPPC12Q8WVT3 735 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 FAM20AQ96MK3 541 aa14.44□□□□□ -0.1
USE1-209ENST00000601592 FTOQ9C0B1 505 aaKnown RBP eCLIP14.44□□□□□ -0.1
USE1-209ENST00000601592 RRN3P2A6NIE6 340 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 ZBBXA8MT70 800 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 WNT7AO00755 349 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 HBP1O60381 514 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 FGBP02675 491 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 MCM7P33993 719 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 CALCRLQ16602 461 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 TRIM71Q2Q1W2 868 aaKnown RBP14.43□□□□□ -0.1
USE1-209ENST00000601592 ZNF618Q5T7W0 954 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 RUFY4Q6ZNE9 571 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 OTOP2Q7RTS6 562 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 NOSTRINQ8IVI9 506 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 ATP8B4Q8TF62 1192 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 ZBTB10Q96DT7 871 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 FAM49AQ9H0Q0 323 aaPredicted RBP14.43□□□□□ -0.1
USE1-209ENST00000601592 MTIF3Q9H2K0 278 aaKnown RBP14.43□□□□□ -0.1
USE1-209ENST00000601592 KCNMB3Q9NPA1 279 aa14.43□□□□□ -0.1
USE1-209ENST00000601592 NOL7Q9UMY1 257 aaKnown RBP14.43□□□□□ -0.1
USE1-209ENST00000601592 IGSF9BQ9UPX0 1349 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 KIF28PB7ZC32 967 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 SOX1O00570 391 aaPredicted RBP14.42□□□□□ -0.1
USE1-209ENST00000601592 TBX3O15119 743 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms