RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 CXCL10P02778 98 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 IQCF3P0C7M6 154 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 CKBP12277 381 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 CCL23P55773 120 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
LINC00649-212ENST00000601471 KRT76Q01546 638 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 EARS2Q5JPH6 523 aaKnown RBP10.86□□□□□ -0.67
LINC00649-212ENST00000601471 TMEM240Q5SV17 173 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 UTP14CQ5TAP6 766 aaKnown RBP10.86□□□□□ -0.67
LINC00649-212ENST00000601471 RPAINQ86UA6 219 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 CCDC60Q8IWA6 550 aaPredicted RBP10.86□□□□□ -0.67
LINC00649-212ENST00000601471 CCDC83Q8IWF9 413 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 SCLYQ96I15 445 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 KCNMB3Q9NPA1 279 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 NOD1Q9Y239 953 aa10.86□□□□□ -0.67
LINC00649-212ENST00000601471 IGSF9BQ9UPX0 1349 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 TET1Q8NFU7 2136 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 TREHO43280 583 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 PARNO95453 639 aaKnown RBP10.85□□□□□ -0.67
LINC00649-212ENST00000601471 SELPP16109 830 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 GCFC2P16383 781 aaKnown RBP10.85□□□□□ -0.67
LINC00649-212ENST00000601471 KRT2P35908 639 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 CHMP4BP1P59074 171 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 HMGN5P82970 282 aaKnown RBP10.85□□□□□ -0.67
LINC00649-212ENST00000601471 NR5A1Q13285 461 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 INF2Q27J81 1249 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 MARCH8Q5T0T0 291 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 KRT40Q6A162 431 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 LRRC8DQ7L1W4 858 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 NEK8Q86SG6 692 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 HERVK_113Q902F9 699 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 ATP6V0A1Q93050 837 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
LINC00649-212ENST00000601471 SETD4Q9NVD3 440 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
LINC00649-212ENST00000601471 PTPRSQ13332 1948 aa10.85□□□□□ -0.67
LINC00649-212ENST00000601471 CCDC194A0A1B0GVG4 234 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 WDR64B1ANS9 1081 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 SLC37A4O43826 429 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 GNAT1P11488 350 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 ATP4AP20648 1035 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 MCM2P49736 904 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 STAT5BP51692 787 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 SMAD3P84022 425 aaKnown RBP10.84□□□□□ -0.67
LINC00649-212ENST00000601471 PPFIA1Q13136 1202 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
LINC00649-212ENST00000601471 MBTPS1Q14703 1052 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 PLCB4Q15147 1175 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 GRIK4Q16099 956 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 MIS18BP1Q6P0N0 1132 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 TAF2Q6P1X5 1199 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 PIK3AP1Q6ZUJ8 805 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 DIS3L2Q8IYB7 885 aaKnown RBP10.84□□□□□ -0.67
LINC00649-212ENST00000601471 RPUSD2Q8IZ73 545 aaKnown RBP10.84□□□□□ -0.67
LINC00649-212ENST00000601471 FBXO18Q8NFZ0 1043 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 GLG1Q92896 1179 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 TMX3Q96JJ7 454 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 NAP1L4Q99733 375 aaKnown RBP10.84□□□□□ -0.67
LINC00649-212ENST00000601471 AZI2Q9H6S1 392 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 BRMS1Q9HCU9 246 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
LINC00649-212ENST00000601471 VAV3Q9UKW4 847 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 MYH9P35579 1960 aaKnown RBP10.84□□□□□ -0.67
LINC00649-212ENST00000601471 KAT6AQ92794 2004 aa10.84□□□□□ -0.67
LINC00649-212ENST00000601471 GBF1Q92538 1859 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 COL1A2P08123 1366 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 ZBTB42B2RXF5 422 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 BTBD18B2RXH4 712 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 DDX39AO00148 427 aaKnown RBP10.83□□□□□ -0.68
LINC00649-212ENST00000601471 TBX3O15119 743 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 NBNO60934 754 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 RPLP2P05387 115 aaKnown RBP10.83□□□□□ -0.68
LINC00649-212ENST00000601471 ACRP10323 421 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 INSRRP14616 1297 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 MARK3P27448 753 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 SFNP31947 248 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 LETM2Q2VYF4 491 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 FAM26DQ5JW98 314 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 ZNF618Q5T7W0 954 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 LRCH2Q5VUJ6 765 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 FAM109BQ6ICB4 259 aaPredicted RBP10.83□□□□□ -0.68
LINC00649-212ENST00000601471 RETREG2Q8NC44 543 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 RDM1Q8NG50 284 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 ATP8B4Q8TF62 1192 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 ZNF302Q9NR11 478 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 CXXC1Q9P0U4 656 aaPredicted RBP10.83□□□□□ -0.68
LINC00649-212ENST00000601471 TUBE1Q9UJT0 475 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 PCDHA10Q9Y5I2 948 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 MUC3AQ02505 3323 aa10.83□□□□□ -0.68
LINC00649-212ENST00000601471 POTEB3A0JP26 581 aa10.82□□□□□ -0.68
LINC00649-212ENST00000601471 RRN3P2A6NIE6 340 aa10.82□□□□□ -0.68
LINC00649-212ENST00000601471 WNT7AO00755 349 aa10.82□□□□□ -0.68
LINC00649-212ENST00000601471 GAS7O60861 476 aa10.82□□□□□ -0.68
LINC00649-212ENST00000601471 BAIAP3O94812 1187 aa10.82□□□□□ -0.68
LINC00649-212ENST00000601471 FGBP02675 491 aa10.82□□□□□ -0.68
LINC00649-212ENST00000601471 PSAPP07602 524 aa10.82□□□□□ -0.68
LINC00649-212ENST00000601471 JAK3P52333 1124 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms