RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 MYCLP12524 364 aaPredicted RBP20.53■□□□□ 0.88
SSBP4-207ENST00000600244 NPR3P17342 541 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 AOC1P19801 751 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 HSD17B4P51659 736 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 RUFY4Q6ZNE9 571 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 STOX1Q6ZVD7 989 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 ZBTB40Q9NUA8 1239 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 CDH22Q9UJ99 828 aa20.53■□□□□ 0.88
SSBP4-207ENST00000600244 OPLAHO14841 1288 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 SRGAP2BP0DMP2 458 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 GATMP50440 423 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 TAF2Q6P1X5 1199 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 TSHZ1Q6ZSZ6 1077 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 DTWD2Q8NBA8 298 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 POMKQ9H5K3 350 aa20.52■□□□□ 0.88
SSBP4-207ENST00000600244 CCDC171Q6TFL3 1326 aa20.52■□□□□ 0.87
SSBP4-207ENST00000600244 CHD6Q8TD26 2715 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 CFBP00751 764 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 CENPBP07199 599 aaPredicted RBP20.51■□□□□ 0.87
SSBP4-207ENST00000600244 ASGR2P07307 311 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 TRIM50Q86XT4 487 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 ADGRF4Q8IZF3 695 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 FLCNQ8NFG4 579 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 IL31RAQ8NI17 732 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 PCDHB12Q9Y5F1 795 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 BAHCC1Q9P281 2608 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 NRCAMQ92823 1304 aa20.51■□□□□ 0.87
SSBP4-207ENST00000600244 SPTBN2O15020 2390 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 FGF18O76093 207 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 STAG3L1P0CL83 205 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 CD52P31358 61 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 PGM5Q15124 567 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 QRICH1Q2TAL8 776 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 ZDHHC14Q8IZN3 488 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 NECTIN4Q96NY8 510 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 GPR20Q99678 358 aa20.5■□□□□ 0.87
SSBP4-207ENST00000600244 NOP56O00567 594 aaKnown RBP20.49■□□□□ 0.87
SSBP4-207ENST00000600244 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
SSBP4-207ENST00000600244 ZFP91Q96JP5 570 aaPredicted RBP20.49■□□□□ 0.87
SSBP4-207ENST00000600244 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
SSBP4-207ENST00000600244 FTHL17Q9BXU8 183 aa20.49■□□□□ 0.87
SSBP4-207ENST00000600244 ADAM7Q9H2U9 754 aa20.49■□□□□ 0.87
SSBP4-207ENST00000600244 TOMM22Q9NS69 142 aa20.49■□□□□ 0.87
SSBP4-207ENST00000600244 LIMD1Q9UGP4 676 aa20.49■□□□□ 0.87
SSBP4-207ENST00000600244 CDY2AQ9Y6F7 541 aa20.49■□□□□ 0.87
SSBP4-207ENST00000600244 FRYLO94915 3013 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 ALX1Q15699 326 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 VPS53Q5VIR6 699 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 METTL7BQ6UX53 244 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 RSPH3Q86UC2 560 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 MAP3K20Q9NYL2 800 aaKnown RBP20.48■□□□□ 0.87
SSBP4-207ENST00000600244 ZNF215Q9UL58 517 aaPredicted RBP20.48■□□□□ 0.87
SSBP4-207ENST00000600244 DDX19BQ9UMR2 479 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 TELO2Q9Y4R8 837 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 SQORQ9Y6N5 450 aa20.48■□□□□ 0.87
SSBP4-207ENST00000600244 MAP1BP46821 2468 aaKnown RBP20.48■□□□□ 0.87
SSBP4-207ENST00000600244 CHD8Q9HCK8 2581 aa20.47■□□□□ 0.87
SSBP4-207ENST00000600244 LLGL2Q6P1M3 1020 aa20.47■□□□□ 0.87
SSBP4-207ENST00000600244 DNAJB3Q8WWF6 145 aa20.47■□□□□ 0.87
SSBP4-207ENST00000600244 AAASQ9NRG9 546 aa20.47■□□□□ 0.87
SSBP4-207ENST00000600244 TMEM260Q9NX78 707 aa20.47■□□□□ 0.87
SSBP4-207ENST00000600244 R4GN57 208 aa20.47■□□□□ 0.87
SSBP4-207ENST00000600244 CFAP47Q6ZTR5 3102 aa20.47■□□□□ 0.87
SSBP4-207ENST00000600244 KAT6AQ92794 2004 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 MBLAC1A4D2B0 266 aaPredicted RBP20.46■□□□□ 0.87
SSBP4-207ENST00000600244 SCG2P13521 617 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 ITIH3Q06033 890 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 TPRNQ4KMQ1 711 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 CES5AQ6NT32 575 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 CYP2W1Q8TAV3 490 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 GPATCH3Q96I76 525 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 JMJD4Q9H9V9 463 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 LZTS1Q9Y250 596 aa20.46■□□□□ 0.87
SSBP4-207ENST00000600244 HIDE1A8MVS5 230 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 CCND2P30279 289 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 APOBRQ0VD83 1088 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 NEDD9Q14511 834 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 RSPO4Q2I0M5 234 aaPredicted RBP20.45■□□□□ 0.86
SSBP4-207ENST00000600244 UTP14CQ5TAP6 766 aaKnown RBP20.45■□□□□ 0.86
SSBP4-207ENST00000600244 PLPP4Q5VZY2 271 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 CYFIP1Q7L576 1253 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 RUBCNQ92622 972 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 PADI3Q9ULW8 664 aa20.45■□□□□ 0.86
SSBP4-207ENST00000600244 SPATA31C2B4DYI2 1134 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 MTHFRP42898 656 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
SSBP4-207ENST00000600244 PLCB3Q01970 1234 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 SEMA3FQ13275 785 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 ST3GAL2Q16842 350 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 MARCH8Q5T0T0 291 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 THNSL1Q8IYQ7 743 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 PLCD3Q8N3E9 789 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 DCLK2Q8N568 766 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 SAMD3Q8N6K7 520 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 TDRD5Q8NAT2 981 aaKnown RBP20.44■□□□□ 0.86
SSBP4-207ENST00000600244 COLGALT1Q8NBJ5 622 aa20.44■□□□□ 0.86
SSBP4-207ENST00000600244 MRPS27Q92552 414 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms