RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 SAMM50Q9Y512 469 aa13.79□□□□□ -0.2
TGFB1-204ENST00000600196 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 SLITRK3O94933 977 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 F2P00734 622 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
TGFB1-204ENST00000600196 MARCKSP29966 332 aaPredicted RBP13.78□□□□□ -0.2
TGFB1-204ENST00000600196 LRRC41Q15345 812 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 SESTD1Q86VW0 696 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
TGFB1-204ENST00000600196 COPS5Q92905 334 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 CALML4Q96GE6 196 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 NACC1Q96RE7 527 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 EIF2AK1Q9BQI3 630 aaKnown RBP13.78□□□□□ -0.2
TGFB1-204ENST00000600196 MTG1Q9BT17 334 aaPredicted RBP13.78□□□□□ -0.2
TGFB1-204ENST00000600196 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
TGFB1-204ENST00000600196 ZNF302Q9NR11 478 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
TGFB1-204ENST00000600196 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 KBTBD13C9JR72 458 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 H3BRB1 525 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 HAS3O00219 553 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 EML1O00423 815 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 HBP1O60381 514 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 LGALS2P05162 132 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 PURAQ00577 322 aaKnown RBP13.77□□□□□ -0.21
TGFB1-204ENST00000600196 MTFR1Q15390 333 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 XKR3Q5GH77 459 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 RESP18Q5W5W9 173 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 SWSAP1Q6NVH7 229 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 FAM43BQ6ZT52 329 aaPredicted RBP13.77□□□□□ -0.21
TGFB1-204ENST00000600196 ELOA2Q8IYF1 753 aaPredicted RBP13.77□□□□□ -0.21
TGFB1-204ENST00000600196 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
TGFB1-204ENST00000600196 CCDC34Q96HJ3 373 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 DEFB118Q96PH6 123 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 C16orf70Q9BSU1 422 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 FTOQ9C0B1 505 aaKnown RBP eCLIP13.77□□□□□ -0.21
TGFB1-204ENST00000600196 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 CSRNP2Q9H175 543 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 TUT1Q9H6E5 874 aaKnown RBP13.77□□□□□ -0.21
TGFB1-204ENST00000600196 MAGEF1Q9HAY2 307 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 KCND2Q9NZV8 630 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 DBR1Q9UK59 544 aaKnown RBP13.77□□□□□ -0.21
TGFB1-204ENST00000600196 IGSF9BQ9UPX0 1349 aa13.77□□□□□ -0.21
TGFB1-204ENST00000600196 COL1A2P08123 1366 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 RRN3P2A6NIE6 340 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 BACH1O14867 736 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 GNAT1P11488 350 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 ACLYP53396 1101 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 UBE2HP62256 183 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 KCNA10Q16322 511 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 ZNF484Q5JVG2 852 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 CABP7Q86V35 215 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 CATSPER3Q86XQ3 398 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 IQUBQ8NA54 791 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 SNX29Q8TEQ0 813 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 ATP8B4Q8TF62 1192 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 GLG1Q92896 1179 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 JPH2Q9BR39 696 aaPredicted RBP13.76□□□□□ -0.21
TGFB1-204ENST00000600196 PKD2L1Q9P0L9 805 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 KCNG1Q9UIX4 513 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 DNM3Q9UQ16 869 aa13.76□□□□□ -0.21
TGFB1-204ENST00000600196 NRCAMQ92823 1304 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 POTEMA6NI47 508 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
TGFB1-204ENST00000600196 PGK1P00558 417 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 TFRCP02786 760 aaKnown RBP13.75□□□□□ -0.21
TGFB1-204ENST00000600196 ASGR1P07306 291 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
TGFB1-204ENST00000600196 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
TGFB1-204ENST00000600196 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 SHC4Q6S5L8 630 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
TGFB1-204ENST00000600196 CDK5RAP3Q96JB5 506 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 PCYT2Q99447 389 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 MMTAG2Q9BU76 263 aaKnown RBP13.75□□□□□ -0.21
TGFB1-204ENST00000600196 TIPINQ9BVW5 301 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 BCAS3Q9H6U6 928 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 GABBR1Q9UBS5 961 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 HPSEQ9Y251 543 aa13.75□□□□□ -0.21
TGFB1-204ENST00000600196 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 MAGEB2O15479 319 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 CHMP2AO43633 222 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 GAS2O43903 313 aaKnown RBP13.74□□□□□ -0.21
TGFB1-204ENST00000600196 OATP04181 439 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 MYL1P05976 194 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 CDC42EP1Q00587 391 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 GJC2Q5T442 439 aaPredicted RBP13.74□□□□□ -0.21
TGFB1-204ENST00000600196 KANK3Q6NY19 840 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms