RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 RPAINQ86UA6 219 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 DEFB123Q8N688 67 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 GLG1Q92896 1179 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
VRK3-215ENST00000599138 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 GJB4Q9NTQ9 266 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 MTMR10Q9NXD2 777 aa11.01□□□□□ -0.65
VRK3-215ENST00000599138 TMEM265A0A087WTH1 108 aa11□□□□□ -0.65
VRK3-215ENST00000599138 GRXCR1A8MXD5 290 aa11□□□□□ -0.65
VRK3-215ENST00000599138 DDX39AO00148 427 aaKnown RBP11□□□□□ -0.65
VRK3-215ENST00000599138 JAK2O60674 1132 aa11□□□□□ -0.65
VRK3-215ENST00000599138 MARK3P27448 753 aa11□□□□□ -0.65
VRK3-215ENST00000599138 SLC26A2P50443 739 aa11□□□□□ -0.65
VRK3-215ENST00000599138 KRT76Q01546 638 aa11□□□□□ -0.65
VRK3-215ENST00000599138 PPFIA1Q13136 1202 aa11□□□□□ -0.65
VRK3-215ENST00000599138 PLCB4Q15147 1175 aa11□□□□□ -0.65
VRK3-215ENST00000599138 NONOQ15233 471 aaKnown RBP eCLIP11□□□□□ -0.65
VRK3-215ENST00000599138 GRIK4Q16099 956 aa11□□□□□ -0.65
VRK3-215ENST00000599138 FAM26DQ5JW98 314 aa11□□□□□ -0.65
VRK3-215ENST00000599138 CCDC60Q8IWA6 550 aaPredicted RBP11□□□□□ -0.65
VRK3-215ENST00000599138 OXER1Q8TDS5 423 aa11□□□□□ -0.65
VRK3-215ENST00000599138 SLC5A5Q92911 643 aa11□□□□□ -0.65
VRK3-215ENST00000599138 TNFRSF25Q93038 417 aa11□□□□□ -0.65
VRK3-215ENST00000599138 RIT2Q99578 217 aa11□□□□□ -0.65
VRK3-215ENST00000599138 TTYH1Q9H313 450 aaPredicted RBP11□□□□□ -0.65
VRK3-215ENST00000599138 COL6A3P12111 3177 aa11□□□□□ -0.65
VRK3-215ENST00000599138 GBF1Q92538 1859 aa11□□□□□ -0.65
VRK3-215ENST00000599138 EVPLQ92817 2033 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 CHD7Q9P2D1 2997 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 CUL9Q8IWT3 2517 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 RRN3P2A6NIE6 340 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 RSPH10B2B2RC85 870 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 BAIAP3O94812 1187 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 TDP2O95551 362 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 RSPH10BP0C881 870 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 ACTN1P12814 892 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 INSRRP14616 1297 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 ATP4AP20648 1035 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 DNAJB2P25686 324 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 THPOP40225 353 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
VRK3-215ENST00000599138 RABEP1Q15276 862 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 INF2Q27J81 1249 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 TCTN1Q2MV58 587 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 MIS18BP1Q6P0N0 1132 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 TAF2Q6P1X5 1199 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 B3GNT9Q6UX72 402 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 RUFY4Q6ZNE9 571 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 SMAP1Q8IYB5 467 aaPredicted RBP10.99□□□□□ -0.65
VRK3-215ENST00000599138 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 ETNPPLQ8TBG4 499 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 ZSCAN31Q96LW9 406 aaPredicted RBP10.99□□□□□ -0.65
VRK3-215ENST00000599138 UIMC1Q96RL1 719 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 LLPHQ9BRT6 129 aaKnown RBP10.99□□□□□ -0.65
VRK3-215ENST00000599138 PBX4Q9BYU1 374 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 SEMA6BQ9H3T3 888 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 PCDHA10Q9Y5I2 948 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 MAFBQ9Y5Q3 323 aaPredicted RBP10.99□□□□□ -0.65
VRK3-215ENST00000599138 SLC4A7Q9Y6M7 1214 aa10.99□□□□□ -0.65
VRK3-215ENST00000599138 PTPRSQ13332 1948 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 MICAL3Q7RTP6 2002 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 CCDC194A0A1B0GVG4 234 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 PSMD10O75832 226 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 MMP1P03956 469 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 PBX2P40425 430 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 EARS2Q5JPH6 523 aaKnown RBP10.98□□□□□ -0.65
VRK3-215ENST00000599138 ZNF697Q5TEC3 545 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 PPP4R3AQ6IN85 833 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 SWSAP1Q6NVH7 229 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 CNKSR3Q6P9H4 555 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 PHOSPHO2Q8TCD6 241 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 TNPO1Q92973 898 aaKnown RBP10.98□□□□□ -0.65
VRK3-215ENST00000599138 GUCD1Q96NT3 240 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 FTOQ9C0B1 505 aaKnown RBP eCLIP10.98□□□□□ -0.65
VRK3-215ENST00000599138 ZNF302Q9NR11 478 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 SH2B1Q9NRF2 756 aaPredicted RBP10.98□□□□□ -0.65
VRK3-215ENST00000599138 TUBE1Q9UJT0 475 aa10.98□□□□□ -0.65
VRK3-215ENST00000599138 ABHD14A-ACY1A0A1B0GW23 586 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 ZBBXA8MT70 800 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 WDR64B1ANS9 1081 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 BACH1O14867 736 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 SLC37A4O43826 429 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 HBP1O60381 514 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 GAS7O60861 476 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 CHRNA1P02708 482 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 PSAPP07602 524 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 GCFC2P16383 781 aaKnown RBP10.97□□□□□ -0.65
VRK3-215ENST00000599138 ATP2A2P16615 1042 aaKnown RBP10.97□□□□□ -0.65
VRK3-215ENST00000599138 KRT2P35908 639 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 MGAT3Q09327 533 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 NR5A1Q13285 461 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 RAB30Q15771 203 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 PLEKHG4Q58EX7 1191 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 KRT40Q6A162 431 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 PDXDC2PQ6P474 469 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms