RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 RETREG2Q8NC44 543 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 ATP6V0A1Q93050 837 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.221e-8■□□□□ 10.6
ZNF548-209ENST00000598895 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
ZNF548-209ENST00000598895 AZI2Q9H6S1 392 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 A0A1W2PPC1 479 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 BACH1O14867 736 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 TREHO43280 583 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 PPIGQ13427 754 aaKnown RBP eCLIP13.65□□□□□ -0.228e-8■■□□□ 12.3
ZNF548-209ENST00000598895 BFSP2Q13515 415 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 ZBTB10Q96DT7 871 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 LRCH3Q96II8 777 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 C8orf76Q96K31 380 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 RNPC3Q96LT9 517 aaKnown RBP13.65□□□□□ -0.22
ZNF548-209ENST00000598895 SMARCAD1Q9H4L7 1026 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 TBC1D22BQ9NU19 505 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 ERAP1Q9NZ08 941 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 DDX25Q9UHL0 483 aaKnown RBP13.65□□□□□ -0.22
ZNF548-209ENST00000598895 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 SAMM50Q9Y512 469 aa13.65□□□□□ -0.22
ZNF548-209ENST00000598895 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 SLC37A4O43826 429 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
ZNF548-209ENST00000598895 GAS7O60861 476 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 LGR5O75473 907 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 STAT5BP51692 787 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 PPFIA1Q13136 1202 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 PTK7Q13308 1070 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 Q4G0T1 1027 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 LRCH2Q5VUJ6 765 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 SWSAP1Q6NVH7 229 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 ABHD15Q6UXT9 468 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 CCDC60Q8IWA6 550 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-209ENST00000598895 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 LMBR1Q8WVP7 490 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 TNFRSF25Q93038 417 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 TEKT3Q9BXF9 490 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 PANK2Q9BZ23 570 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
ZNF548-209ENST00000598895 ATG7O95352 703 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 IQCF3P0C7M6 154 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 CKBP12277 381 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 THPOP40225 353 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 ZNF445P59923 1031 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 HMGN5P82970 282 aaKnown RBP13.63□□□□□ -0.23
ZNF548-209ENST00000598895 PLCB4Q15147 1175 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 GRIK4Q16099 956 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 TMEM240Q5SV17 173 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 FAM160B1Q5W0V3 765 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 LRRC8DQ7L1W4 858 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 UNC45AQ9H3U1 944 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 ZNF302Q9NR11 478 aa13.63□□□□□ -0.23
ZNF548-209ENST00000598895 CYP3A7-CYP3A51PA0A087WV96 503 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 ESPNB1AK53 854 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 WNT7AO00755 349 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 FGBP02675 491 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 CTSHP09668 335 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 INSRRP14616 1297 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 SELPP16109 830 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 CYP3A7P24462 503 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 KRT76Q01546 638 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
ZNF548-209ENST00000598895 SAFBQ15424 915 aaKnown RBP eCLIP13.62□□□□□ -0.23
ZNF548-209ENST00000598895 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
ZNF548-209ENST00000598895 ZNF618Q5T7W0 954 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 ZNF746Q6NUN9 644 aaPredicted RBP13.62□□□□□ -0.23
ZNF548-209ENST00000598895 PDXDC2PQ6P474 469 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 RUFY4Q6ZNE9 571 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 SERINC5Q86VE9 423 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 POTEDQ86YR6 584 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 AFAP1L1Q8TED9 768 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 MBOAT7Q96N66 472 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
ZNF548-209ENST00000598895 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 GABBR1Q9UBS5 961 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 KAT6AQ92794 2004 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 NRCAMQ92823 1304 aa13.62□□□□□ -0.23
ZNF548-209ENST00000598895 WDR81Q562E7 1941 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 IGKV6D-21A0A0A0MT36 114 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 ZBBXA8MT70 800 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 MARCH6O60337 910 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 PSMD10O75832 226 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 PSAPP07602 524 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 GNAT1P11488 350 aa13.61□□□□□ -0.23
ZNF548-209ENST00000598895 HOXC8P31273 242 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms