RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FLT3LGP49771 235 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 AMPD3Q01432 767 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 KRT76Q01546 638 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 ITGB3BPQ13352 177 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 E2F4Q16254 413 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 MORN1Q5T089 497 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 LRSAM1Q6UWE0 723 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 RBM43Q6ZSC3 357 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 ARMCX2Q7L311 632 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 EEPD1Q7L9B9 569 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 ANKLE1Q8NAG6 615 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 GIMAP8Q8ND71 665 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 CDX2Q99626 313 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 POLR3CQ9BUI4 534 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 MAGEF1Q9HAY2 307 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 TUFT1Q9NNX1 390 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 KIAA1468Q9P260 1216 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 STK17AQ9UEE5 414 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 KIAA1024Q9UPX6 916 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 SAMM50Q9Y512 469 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 NFASCO94856 1347 aa14.62□□□□□ -0.07
SHKBP1-209ENST00000595803 TNFRSF10AO00220 468 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 MED24O75448 989 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 SMC2O95347 1197 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 CCDC192P0DO97 292 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 SFNP31947 248 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 JAK3P52333 1124 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 MDM2Q00987 491 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 NEDD9Q14511 834 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 POSTNQ15063 836 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 HYIQ5T013 277 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 PDXDC2PQ6P474 469 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 SV2BQ7L1I2 683 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 SH3RF1Q7Z6J0 888 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 CATSPER3Q86XQ3 398 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 TPH2Q8IWU9 490 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 NPLOC4Q8TAT6 608 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 NEK9Q8TD19 979 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 DYDC2Q96IM9 177 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 SENP7Q9BQF6 1050 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 LRRC27Q9C0I9 530 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.61□□□□□ -0.079e-6■■■■■ 32.4
SHKBP1-209ENST00000595803 DNM3Q9UQ16 869 aa14.61□□□□□ -0.07
SHKBP1-209ENST00000595803 PLXNB2O15031 1838 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 TMEM265A0A087WTH1 108 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 GTPBP6O43824 516 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 SLITRK3O94933 977 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 KCNA2P16389 499 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 MUTP22033 750 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 RGS2P41220 211 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 PNOCQ13519 176 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 CTTNQ14247 550 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 GSE1Q14687 1217 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 ECM1Q16610 540 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 TMEM119Q4V9L6 283 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 ZNF746Q6NUN9 644 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 B3GNT9Q6UX72 402 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 MAMDC4Q6UXC1 1216 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 GRAMD1CQ8IYS0 662 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 MSL3Q8N5Y2 521 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 KCTD17Q8N5Z5 321 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 RDM1Q8NG50 284 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 SOCS4Q8WXH5 440 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 RAD54LQ92698 747 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 STAMQ92783 540 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 ERCC4Q92889 916 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 SMARCE1Q969G3 411 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 MAML3Q96JK9 1138 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 HSD17B14Q9BPX1 270 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 TSPY26PQ9H489 355 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 RGL1Q9NZL6 768 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 LCTP09848 1927 aa14.6□□□□□ -0.07
SHKBP1-209ENST00000595803 POTEB3A0JP26 581 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 WDR64B1ANS9 1081 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 P4HBP07237 508 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 SPATA31C1P0DKV0 1188 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 CYP2B6P20813 491 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 SP2Q02086 613 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 CYP4A11Q02928 519 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 IRF5Q13568 498 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 DHX8Q14562 1220 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 NAALADL2Q58DX5 795 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 POTEBQ6S5H4 581 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 FBXO16Q8IX29 292 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 TINF2Q9BSI4 451 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 C11orf49Q9H6J7 331 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 MLXIPQ9HAP2 919 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 JPH1Q9HDC5 661 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 VTA1Q9NP79 307 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 SLC9A2Q9UBY0 812 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 DDX41Q9UJV9 622 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 PCDHA5Q9Y5H7 936 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 PCDHA10Q9Y5I2 948 aa14.59□□□□□ -0.07
SHKBP1-209ENST00000595803 E9PMD0 336 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 SORBS3O60504 671 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 SNAI1O95863 264 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 SSBP05455 408 aaKnown RBP eCLIP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms