RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 TEKT3Q9BXF9 490 aa24.79■■□□□ 1.56
HOMER3-206ENST00000594439 SCN5AQ14524 2016 aa24.79■■□□□ 1.56
HOMER3-206ENST00000594439 MYH9P35579 1960 aaKnown RBP24.78■■□□□ 1.56
HOMER3-206ENST00000594439 RANBP2P49792 3224 aaKnown RBP24.78■■□□□ 1.56
HOMER3-206ENST00000594439 TREHO43280 583 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 CCNT1O60563 726 aaKnown RBP24.78■■□□□ 1.56
HOMER3-206ENST00000594439 PLCB4Q15147 1175 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 SHHQ15465 462 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 C16orf59Q7L2K0 433 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 SERINC5Q86VE9 423 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 CCDC155Q8N6L0 562 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 AFAP1L1Q8TED9 768 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 ATP6V0A1Q93050 837 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 SCLYQ96I15 445 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 KCNMB3Q9NPA1 279 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 TCEAL9Q9UHQ7 104 aa24.78■■□□□ 1.56
HOMER3-206ENST00000594439 BACH1O14867 736 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 GNAT1P11488 350 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 PPFIA1Q13136 1202 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 FAM160B1Q5W0V3 765 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 SWSAP1Q6NVH7 229 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 B3GNT9Q6UX72 402 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 RETREG2Q8NC44 543 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 FOXP1Q9H334 677 aaPredicted RBP24.77■■□□□ 1.56
HOMER3-206ENST00000594439 UNC45AQ9H3U1 944 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 IL23AQ9NPF7 189 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 ZNF302Q9NR11 478 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 PCDHA10Q9Y5I2 948 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 NRCAMQ92823 1304 aa24.77■■□□□ 1.56
HOMER3-206ENST00000594439 WDR64B1ANS9 1081 aa24.76■■□□□ 1.55
HOMER3-206ENST00000594439 WNT7AO00755 349 aa24.76■■□□□ 1.55
HOMER3-206ENST00000594439 GJB2P29033 226 aa24.76■■□□□ 1.55
HOMER3-206ENST00000594439 SLC26A2P50443 739 aa24.76■■□□□ 1.55
HOMER3-206ENST00000594439 CUL4AQ13619 759 aa24.76■■□□□ 1.55
HOMER3-206ENST00000594439 VWCEQ96DN2 955 aa24.76■■□□□ 1.55
HOMER3-206ENST00000594439 KIF3AQ9Y496 699 aa24.76■■□□□ 1.55
HOMER3-206ENST00000594439 PSAPP07602 524 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 IQCF3P0C7M6 154 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 ACRP10323 421 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 GRIK4Q16099 956 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 POTEDQ86YR6 584 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 HAS1Q92839 578 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 FAM20AQ96MK3 541 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.75■■□□□ 1.55
HOMER3-206ENST00000594439 DISC1Q9NRI5 854 aa24.75■■□□□ 1.55
HOMER3-206ENST00000594439 MAFBQ9Y5Q3 323 aaPredicted RBP24.75■■□□□ 1.55
HOMER3-206ENST00000594439 KIF28PB7ZC32 967 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 TBX3O15119 743 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 CHMP2AO43633 222 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 CKBP12277 381 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 INSRRP14616 1297 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 SELPP16109 830 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 ATP4AP20648 1035 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 SFNP31947 248 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 JAK3P52333 1124 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 TMEM240Q5SV17 173 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 MARCH8Q5T0T0 291 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 PDXDC2PQ6P474 469 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 TRAF7Q6Q0C0 670 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 SMC3Q9UQE7 1217 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 TRPC6Q9Y210 931 aa24.74■■□□□ 1.55
HOMER3-206ENST00000594439 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.74■■□□□ 1.55
HOMER3-206ENST00000594439 IGSF9BQ9UPX0 1349 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 POTEB3A0JP26 581 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 RFC2P35250 354 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 POTEBQ6S5H4 581 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 ZNF365Q70YC5 407 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 LRRC8DQ7L1W4 858 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 RDM1Q8NG50 284 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 ATP8B4Q8TF62 1192 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 GABBR1Q9UBS5 961 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 VAV3Q9UKW4 847 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 SAMM50Q9Y512 469 aa24.73■■□□□ 1.55
HOMER3-206ENST00000594439 MBLAC1A4D2B0 266 aaPredicted RBP24.72■■□□□ 1.55
HOMER3-206ENST00000594439 RRN3P2A6NIE6 340 aa24.72■■□□□ 1.55
HOMER3-206ENST00000594439 FXR1P51114 621 aaKnown RBP eCLIP24.72■■□□□ 1.55
HOMER3-206ENST00000594439 GPNMBQ14956 572 aa24.72■■□□□ 1.55
HOMER3-206ENST00000594439 LRIT3Q3SXY7 679 aa24.72■■□□□ 1.55
HOMER3-206ENST00000594439 ZNF618Q5T7W0 954 aa24.72■■□□□ 1.55
HOMER3-206ENST00000594439 PSRC1Q6PGN9 363 aaPredicted RBP24.72■■□□□ 1.55
HOMER3-206ENST00000594439 MIER3Q7Z3K6 550 aa24.72■■□□□ 1.55
HOMER3-206ENST00000594439 NOSTRINQ8IVI9 506 aa24.72■■□□□ 1.55
HOMER3-206ENST00000594439 RPUSD2Q8IZ73 545 aaKnown RBP24.72■■□□□ 1.55
HOMER3-206ENST00000594439 TNPO1Q92973 898 aaKnown RBP24.72■■□□□ 1.55
HOMER3-206ENST00000594439 TET1Q8NFU7 2136 aa24.71■■□□□ 1.55
HOMER3-206ENST00000594439 HBP1O60381 514 aa24.71■■□□□ 1.55
HOMER3-206ENST00000594439 U2AF2P26368 475 aaKnown RBP eCLIP24.71■■□□□ 1.554e-7■■■□□ 17.8
HOMER3-206ENST00000594439 IGBP1P78318 339 aa24.71■■□□□ 1.55
HOMER3-206ENST00000594439 PPP2R5CQ13362 524 aa24.71■■□□□ 1.55
HOMER3-206ENST00000594439 RUFY4Q6ZNE9 571 aa24.71■■□□□ 1.55
HOMER3-206ENST00000594439 TRAPPC12Q8WVT3 735 aa24.71■■□□□ 1.55
HOMER3-206ENST00000594439 TUBE1Q9UJT0 475 aa24.71■■□□□ 1.55
HOMER3-206ENST00000594439 SOX1O00570 391 aaPredicted RBP24.7■■□□□ 1.54
HOMER3-206ENST00000594439 ZNF862O60290 1169 aa24.7■■□□□ 1.54
HOMER3-206ENST00000594439 ATP2B1P20020 1258 aa24.7■■□□□ 1.54
HOMER3-206ENST00000594439 THPOP40225 353 aa24.7■■□□□ 1.54
HOMER3-206ENST00000594439 GNL2Q13823 731 aaKnown RBP24.7■■□□□ 1.54
HOMER3-206ENST00000594439 UGCGQ16739 394 aa24.7■■□□□ 1.54
HOMER3-206ENST00000594439 DEFB128Q7Z7B8 93 aa24.7■■□□□ 1.54
HOMER3-206ENST00000594439 ZBTB10Q96DT7 871 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms