RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 GNAT1P11488 350 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 STAT5BP51692 787 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 RBL2Q08999 1139 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 PPFIA1Q13136 1202 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 C9orf50Q5SZB4 431 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 FAM160B1Q5W0V3 765 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 SERINC5Q86VE9 423 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 AFAP1L1Q8TED9 768 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 WNT8BQ93098 351 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 SCLYQ96I15 445 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 FOXP1Q9H334 677 aaPredicted RBP16.46■□□□□ 0.23
VRK3-206ENST00000594090 UNC45AQ9H3U1 944 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 KCNMB3Q9NPA1 279 aa16.46■□□□□ 0.23
VRK3-206ENST00000594090 WDR64B1ANS9 1081 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 TREHO43280 583 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 GJB2P29033 226 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 SLC26A2P50443 739 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 ADAM17P78536 824 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 PLCB4Q15147 1175 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 SHHQ15465 462 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 GRIK4Q16099 956 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 TRIM71Q2Q1W2 868 aaKnown RBP16.45■□□□□ 0.22
VRK3-206ENST00000594090 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 FAM20AQ96MK3 541 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 IL23AQ9NPF7 189 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 ZNF302Q9NR11 478 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 TRPC6Q9Y210 931 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 WDR81Q562E7 1941 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 WNT7AO00755 349 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 CHMP2AO43633 222 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 PSAPP07602 524 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 CKBP12277 381 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 SFNP31947 248 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 CUL4AQ13619 759 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 SWSAP1Q6NVH7 229 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 PDXDC2PQ6P474 469 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 B3GNT9Q6UX72 402 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 RETREG2Q8NC44 543 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 DISC1Q9NRI5 854 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 SAMM50Q9Y512 469 aa16.45■□□□□ 0.22
VRK3-206ENST00000594090 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
VRK3-206ENST00000594090 IGSF9BQ9UPX0 1349 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 SCN5AQ14524 2016 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 LAMA3Q16787 3333 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 POTEB3A0JP26 581 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 TBX3O15119 743 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 IQCF3P0C7M6 154 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 ACRP10323 421 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 INSRRP14616 1297 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 JAK3P52333 1124 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 PSRC1Q6PGN9 363 aaPredicted RBP16.44■□□□□ 0.22
VRK3-206ENST00000594090 POTEBQ6S5H4 581 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 LRRC8DQ7L1W4 858 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 C16orf59Q7L2K0 433 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 RDM1Q8NG50 284 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■■□□ 15.1
VRK3-206ENST00000594090 TUBE1Q9UJT0 475 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
VRK3-206ENST00000594090 MAFBQ9Y5Q3 323 aaPredicted RBP16.44■□□□□ 0.22
VRK3-206ENST00000594090 KAT6AQ92794 2004 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 MBLAC1A4D2B0 266 aaPredicted RBP16.43■□□□□ 0.22
VRK3-206ENST00000594090 KIF28PB7ZC32 967 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 SELPP16109 830 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 RFC2P35250 354 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 MYH9P35579 1960 aaKnown RBP16.43■□□□□ 0.22
VRK3-206ENST00000594090 IGBP1P78318 339 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 GNL2Q13823 731 aaKnown RBP16.43■□□□□ 0.22
VRK3-206ENST00000594090 TMEM240Q5SV17 173 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 NOSTRINQ8IVI9 506 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 ATP8B4Q8TF62 1192 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 HAS1Q92839 578 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
VRK3-206ENST00000594090 VWCEQ96DN2 955 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 RNPC3Q96LT9 517 aaKnown RBP16.43■□□□□ 0.22
VRK3-206ENST00000594090 GABBR1Q9UBS5 961 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 VAV3Q9UKW4 847 aa16.43■□□□□ 0.22
VRK3-206ENST00000594090 RRN3P2A6NIE6 340 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 HBP1O60381 514 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 PFKMP08237 780 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 ATP4AP20648 1035 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 THPOP40225 353 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 FXR1P51114 621 aaKnown RBP eCLIP16.42■□□□□ 0.22
VRK3-206ENST00000594090 PPP2R5CQ13362 524 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 LRIT3Q3SXY7 679 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 ZNF618Q5T7W0 954 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 TRAF7Q6Q0C0 670 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 ZNF365Q70YC5 407 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 MIER3Q7Z3K6 550 aa16.42■□□□□ 0.22
VRK3-206ENST00000594090 RPUSD2Q8IZ73 545 aaKnown RBP16.42■□□□□ 0.22
VRK3-206ENST00000594090 MARCH6O60337 910 aa16.41■□□□□ 0.22
VRK3-206ENST00000594090 NEMFO60524 1076 aa16.41■□□□□ 0.22
VRK3-206ENST00000594090 CAND2O75155 1236 aa16.41■□□□□ 0.22
VRK3-206ENST00000594090 BAG4O95429 457 aaKnown RBP16.41■□□□□ 0.22
VRK3-206ENST00000594090 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
VRK3-206ENST00000594090 U2AF2P26368 475 aaKnown RBP eCLIP16.41■□□□□ 0.22
VRK3-206ENST00000594090 CALCRLQ16602 461 aa16.41■□□□□ 0.22
VRK3-206ENST00000594090 UGCGQ16739 394 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms