RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 HOXC8P31273 242 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
ZNF558-202ENST00000593891 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
ZNF558-202ENST00000593891 LPAL2Q16609 132 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 CTR9Q6PD62 1173 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 GPR152Q8TDT2 470 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 NELL1Q92832 810 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 CEP95Q96GE4 821 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 FAM126AQ9BYI3 521 aaPredicted RBP13.94□□□□□ -0.18
ZNF558-202ENST00000593891 ADAM33Q9BZ11 813 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 RNPEPQ9H4A4 650 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 DDX41Q9UJV9 622 aaKnown RBP13.94□□□□□ -0.18
ZNF558-202ENST00000593891 DSPP15924 2871 aaKnown RBP13.94□□□□□ -0.18
ZNF558-202ENST00000593891 MYH8P13535 1937 aa13.94□□□□□ -0.18
ZNF558-202ENST00000593891 MYO5AQ9Y4I1 1855 aaKnown RBP13.93□□□□□ -0.18
ZNF558-202ENST00000593891 KCNK5O95279 499 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 HOXD8P13378 290 aaPredicted RBP13.93□□□□□ -0.18
ZNF558-202ENST00000593891 LIMK1P53667 647 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 LPIN1Q14693 890 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 ZNF444Q8N0Y2 327 aaPredicted RBP13.93□□□□□ -0.18
ZNF558-202ENST00000593891 SLC44A3Q8N4M1 653 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 CELF5Q8N6W0 485 aaKnown RBP13.93□□□□□ -0.18
ZNF558-202ENST00000593891 COLGALT1Q8NBJ5 622 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
ZNF558-202ENST00000593891 FTHL17Q9BXU8 183 aa13.93□□□□□ -0.18
ZNF558-202ENST00000593891 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
ZNF558-202ENST00000593891 CLASP2O75122 1294 aaKnown RBP13.92□□□□□ -0.18
ZNF558-202ENST00000593891 LRRN2O75325 713 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 MBD4O95243 580 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 GATMP50440 423 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 KRT17Q04695 432 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 STXBP2Q15833 593 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 RCSD1Q6JBY9 416 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 KANK3Q6NY19 840 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 KCTD1Q719H9 257 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 PDZD3Q86UT5 571 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 STK11IPQ8N1F8 1099 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 TMEM87AQ8NBN3 555 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 RSAD2Q8WXG1 361 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 MAP4K1Q92918 833 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 NXPE3Q969Y0 559 aa13.92□□□□□ -0.18
ZNF558-202ENST00000593891 ARPP21Q9UBL0 812 aaPredicted RBP13.92□□□□□ -0.18
ZNF558-202ENST00000593891 NBEAQ8NFP9 2946 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 H3BRB1 525 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 TM4SF5O14894 197 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 SCG2P13521 617 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 MAGEA9P43362 315 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 STARD6P59095 220 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 FOXC1Q12948 553 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
ZNF558-202ENST00000593891 BMS1Q14692 1282 aaKnown RBP13.91□□□□□ -0.18
ZNF558-202ENST00000593891 PTPN14Q15678 1187 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 AASDHQ4L235 1098 aaPredicted RBP13.91□□□□□ -0.18
ZNF558-202ENST00000593891 TMC5Q6UXY8 1006 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 RSPH3Q86UC2 560 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
ZNF558-202ENST00000593891 ADAM32Q8TC27 787 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 CLEC4DQ8WXI8 215 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 SPATA33Q96N06 139 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 C16orf70Q9BSU1 422 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 MYL10Q9BUA6 226 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 TUT1Q9H6E5 874 aaKnown RBP13.91□□□□□ -0.18
ZNF558-202ENST00000593891 ZNF287Q9HBT7 754 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 SETD4Q9NVD3 440 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 TLR7Q9NYK1 1049 aaKnown RBP13.91□□□□□ -0.18
ZNF558-202ENST00000593891 PNMA2Q9UL42 364 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 MRVI1Q9Y6F6 885 aa13.91□□□□□ -0.18
ZNF558-202ENST00000593891 LAG3P18627 525 aa13.9□□□□□ -0.18
ZNF558-202ENST00000593891 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
ZNF558-202ENST00000593891 CABP7Q86V35 215 aa13.9□□□□□ -0.18
ZNF558-202ENST00000593891 LINC01599Q8WXQ3 324 aa13.9□□□□□ -0.18
ZNF558-202ENST00000593891 GATA6Q92908 595 aa13.9□□□□□ -0.18
ZNF558-202ENST00000593891 RANBP17Q9H2T7 1088 aaKnown RBP13.9□□□□□ -0.18
ZNF558-202ENST00000593891 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
ZNF558-202ENST00000593891 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.18
ZNF558-202ENST00000593891 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
ZNF558-202ENST00000593891 TTC3P53804 2025 aa13.9□□□□□ -0.18
ZNF558-202ENST00000593891 KANSL1LA0AUZ9 987 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 TBKBP1A7MCY6 615 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 CA8P35219 290 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 NRLP54845 237 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 FBXO47Q5MNV8 452 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 TSSK4Q6SA08 328 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 GPR149Q86SP6 731 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 LCTP09848 1927 aa13.89□□□□□ -0.19
ZNF558-202ENST00000593891 ITPR1Q14643 2758 aa13.88□□□□□ -0.19
ZNF558-202ENST00000593891 PNMA6EA0A0J9YXQ4 647 aa13.88□□□□□ -0.19
ZNF558-202ENST00000593891 SPINK2P20155 84 aa13.88□□□□□ -0.19
ZNF558-202ENST00000593891 IBSPP21815 317 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-202ENST00000593891 GBP2P32456 591 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-202ENST00000593891 LETM2Q2VYF4 491 aa13.88□□□□□ -0.19
ZNF558-202ENST00000593891 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms