RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 GDF6Q6KF10 455 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-212ENST00000590096 SWSAP1Q6NVH7 229 aa24.02■■□□□ 1.44
ATG4D-212ENST00000590096 CCDC60Q8IWA6 550 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-212ENST00000590096 RDM1Q8NG50 284 aa24.02■■□□□ 1.44
ATG4D-212ENST00000590096 AFAP1L1Q8TED9 768 aa24.02■■□□□ 1.44
ATG4D-212ENST00000590096 HAS1Q92839 578 aa24.02■■□□□ 1.44
ATG4D-212ENST00000590096 TNPO1Q92973 898 aaKnown RBP24.02■■□□□ 1.44
ATG4D-212ENST00000590096 TRIM43Q96BQ3 446 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-212ENST00000590096 TBX21Q9UL17 535 aa24.02■■□□□ 1.44
ATG4D-212ENST00000590096 GNAT1P11488 350 aa24.01■■□□□ 1.43
ATG4D-212ENST00000590096 RAG1P15918 1043 aa24.01■■□□□ 1.43
ATG4D-212ENST00000590096 HABP4Q5JVS0 413 aaKnown RBP24.01■■□□□ 1.43
ATG4D-212ENST00000590096 PDXDC2PQ6P474 469 aa24.01■■□□□ 1.43
ATG4D-212ENST00000590096 LBHD1Q9BQE6 289 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-212ENST00000590096 RNPEPQ9H4A4 650 aa24.01■■□□□ 1.43
ATG4D-212ENST00000590096 TRPC6Q9Y210 931 aa24.01■■□□□ 1.43
ATG4D-212ENST00000590096 MYH9P35579 1960 aaKnown RBP24■■□□□ 1.43
ATG4D-212ENST00000590096 KAT6AQ92794 2004 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 PPP2R5CQ13362 524 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 BECN1Q14457 450 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 RILPL1Q5EBL4 403 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 BRAPQ7Z569 592 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 GABBR1Q9UBS5 961 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 VAV3Q9UKW4 847 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 TRIOBPQ9H2D6 2365 aa24■■□□□ 1.43
ATG4D-212ENST00000590096 CYP2C9P11712 490 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 PPFIA1Q13136 1202 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 PLCB4Q15147 1175 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 B3GNT9Q6UX72 402 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 CKAP2LQ8IYA6 745 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 SPRYD3Q8NCJ5 442 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 HIPK3Q9H422 1215 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 SETD4Q9NVD3 440 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 PCDHA12Q9UN75 941 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 MAFBQ9Y5Q3 323 aaPredicted RBP23.99■■□□□ 1.43
ATG4D-212ENST00000590096 NRCAMQ92823 1304 aa23.99■■□□□ 1.43
ATG4D-212ENST00000590096 POTEB3A0JP26 581 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 STX6O43752 255 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 TIMP1P01033 207 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 TXKP42681 527 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 TOB1P50616 345 aaPredicted RBP23.98■■□□□ 1.43
ATG4D-212ENST00000590096 NBR1Q14596 966 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 POTEBQ6S5H4 581 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 FERMT3Q86UX7 667 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 CCDC155Q8N6L0 562 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 ATP6V0A1Q93050 837 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 MTMR9Q96QG7 549 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 PPP1R12CQ9BZL4 782 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 TMEM60Q9H2L4 133 aa23.98■■□□□ 1.43
ATG4D-212ENST00000590096 OR52Z1P0C646 297 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 HOXC8P31273 242 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 ZNF200P98182 395 aaPredicted RBP23.97■■□□□ 1.43
ATG4D-212ENST00000590096 MDM2Q00987 491 aaPredicted RBP23.97■■□□□ 1.43
ATG4D-212ENST00000590096 LTBP2Q14767 1821 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 GRIK4Q16099 956 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 WDR81Q562E7 1941 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 NCAPH2Q6IBW4 605 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 ATP8B4Q8TF62 1192 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 LMBR1Q8WVP7 490 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 FAM167AQ96KS9 214 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 TTC12Q9H892 705 aaPredicted RBP23.97■■□□□ 1.43
ATG4D-212ENST00000590096 IGSF9BQ9UPX0 1349 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 PCDHB6Q9Y5E3 794 aa23.97■■□□□ 1.43
ATG4D-212ENST00000590096 TRIP12Q14669 1992 aaPredicted RBP23.96■■□□□ 1.43
ATG4D-212ENST00000590096 RRN3P2A6NIE6 340 aa23.96■■□□□ 1.43
ATG4D-212ENST00000590096 HBP1O60381 514 aa23.96■■□□□ 1.43
ATG4D-212ENST00000590096 INSRRP14616 1297 aa23.96■■□□□ 1.43
ATG4D-212ENST00000590096 PTK7Q13308 1070 aa23.96■■□□□ 1.43
ATG4D-212ENST00000590096 BFSP2Q13515 415 aa23.96■■□□□ 1.43
ATG4D-212ENST00000590096 BADQ92934 168 aa23.96■■□□□ 1.43
ATG4D-212ENST00000590096 NOC4LQ9BVI4 516 aaKnown RBP23.96■■□□□ 1.43
ATG4D-212ENST00000590096 RANBP2P49792 3224 aaKnown RBP23.95■■□□□ 1.43
ATG4D-212ENST00000590096 EML1O00423 815 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 TREHO43280 583 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 PDIA4P13667 645 aaKnown RBP23.95■■□□□ 1.42
ATG4D-212ENST00000590096 ITGB8P26012 769 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 MAGEA10P43363 369 aaPredicted RBP23.95■■□□□ 1.42
ATG4D-212ENST00000590096 IGBP1P78318 339 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 HIC1Q14526 733 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 EPHA7Q15375 998 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 TRMT1LQ7Z2T5 733 aaKnown RBP23.95■■□□□ 1.42
ATG4D-212ENST00000590096 CAGE1Q8TC20 777 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 BBXQ8WY36 941 aaPredicted RBP23.95■■□□□ 1.42
ATG4D-212ENST00000590096 CTAGE1Q96RT6 745 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.95■■□□□ 1.42
ATG4D-212ENST00000590096 MTMR6Q9Y217 621 aa23.95■■□□□ 1.42
ATG4D-212ENST00000590096 CYP2C18P33260 490 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 SPIRE1Q08AE8 756 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 PTGDRQ13258 359 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 UGCGQ16739 394 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 TMEM266Q2M3C6 531 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 RETREG2Q8NC44 543 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 BANK1Q8NDB2 785 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 NRBP2Q9NSY0 501 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 TUBE1Q9UJT0 475 aa23.94■■□□□ 1.42
ATG4D-212ENST00000590096 LAD1O00515 517 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 PITPNM1O00562 1244 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 DKC1O60832 514 aaKnown RBP eCLIP23.93■■□□□ 1.42
ATG4D-212ENST00000590096 OATP04181 439 aa23.93■■□□□ 1.42
ATG4D-212ENST00000590096 P4HBP07237 508 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms