RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 PPP1R11O60927 126 aaPredicted RBP8.27□□□□□ -1.09
SMAD4-210ENST00000590061 GNRH1P01148 92 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 BCRP11274 1271 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 CMA1P23946 247 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 CCND2P30279 289 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 GPC1P35052 558 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 ERVK-24P63145 666 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 ARHGAP4P98171 946 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 SEMA3FQ13275 785 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 MOGSQ13724 837 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 PKP1Q13835 747 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 TAF1CQ15572 869 aaPredicted RBP8.27□□□□□ -1.09
SMAD4-210ENST00000590061 NPY5RQ15761 445 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 SLC35G1Q2M3R5 365 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 Q4G0T1 1027 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 ARHGEF16Q5VV41 709 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 JAKMIP3Q5VZ66 844 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 PCNX4Q63HM2 1172 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 ZSCAN1Q8NBB4 408 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 LINC00301Q8NCQ3 95 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 REPS2Q8NFH8 660 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 ERMNQ8TAM6 284 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 TBCKQ8TEA7 893 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 LEO1Q8WVC0 666 aaPredicted RBP8.27□□□□□ -1.09
SMAD4-210ENST00000590061 FOXD4L4Q8WXT5 416 aaPredicted RBP8.27□□□□□ -1.09
SMAD4-210ENST00000590061 RMDN3Q96TC7 470 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 ANO3Q9BYT9 981 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 WDR11Q9BZH6 1224 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 LRRC27Q9C0I9 530 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 CPVLQ9H3G5 476 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 GDPD2Q9HCC8 539 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 BIN2Q9UBW5 565 aaPredicted RBP8.27□□□□□ -1.09
SMAD4-210ENST00000590061 FZD1Q9UP38 647 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 SRPRBQ9Y5M8 271 aaKnown RBP8.27□□□□□ -1.09
SMAD4-210ENST00000590061 ZNF536O15090 1300 aa8.27□□□□□ -1.09
SMAD4-210ENST00000590061 FIBPO43427 364 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 TLR2O60603 784 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 DKC1O60832 514 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 PRPF40AO75400 957 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 EIF3JO75822 258 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 HSPA1AP0DMV8 641 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 HSPA1BP0DMV9 641 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 TGFB3P10600 412 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 MUTP22033 750 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 HOXD10P28358 340 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 RPS6P62753 249 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 ATP2C1P98194 919 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CALCRLQ16602 461 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 INF2Q27J81 1249 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 LETM2Q2VYF4 491 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CEP55Q53EZ4 464 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 NSMFQ6X4W1 530 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CYP2U1Q7Z449 544 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 SOCS4Q8WXH5 440 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CLEC4DQ8WXI8 215 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 MMP19Q99542 508 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 PAGR1Q9BTK6 254 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CFHR5Q9BXR6 569 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CUEDC2Q9H467 287 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 MAGEF1Q9HAY2 307 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 TBC1D22BQ9NU19 505 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CYP39A1Q9NYL5 469 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 CCDC39Q9UFE4 941 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 DDX25Q9UHL0 483 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 DDX49Q9Y6V7 483 aaKnown RBP8.26□□□□□ -1.09
SMAD4-210ENST00000590061 FRMPD4Q14CM0 1322 aa8.26□□□□□ -1.09
SMAD4-210ENST00000590061 TCHHQ07283 1943 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 SLC15A5A6NIM6 579 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 KINO60870 393 aaKnown RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 MYL1P05976 194 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 OR52Z1P0C646 297 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 UBA7P41226 1012 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 CLN3Q13286 438 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 NFKBIBQ15653 356 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 ZRSR1Q15695 479 aaKnown RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 STXBP2Q15833 593 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 KLHL40Q2TBA0 621 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 HAUS3Q68CZ6 603 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 USP17L6PQ6QN14 398 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 DLK2Q6UY11 383 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 LYSMD3Q7Z3D4 306 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 FCHSD1Q86WN1 690 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 DHX37Q8IY37 1157 aaKnown RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 ELOA2Q8IYF1 753 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 RDM1Q8NG50 284 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 NEK9Q8TD19 979 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 SYTL5Q8TDW5 730 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 MRPS27Q92552 414 aaKnown RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 GPRASP2Q96D09 838 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 CAPNS2Q96L46 248 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 MBOAT7Q96N66 472 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 USP28Q96RU2 1077 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 RIT2Q99578 217 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 MOV10L1Q9BXT6 1211 aaKnown RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 HOMER2Q9NSB8 354 aa8.25□□□□□ -1.09
SMAD4-210ENST00000590061 DDX19AQ9NUU7 478 aaKnown RBP8.25□□□□□ -1.09
SMAD4-210ENST00000590061 SAGE1Q9NXZ1 904 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms