RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 UIMC1Q96RL1 719 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 DDX39AO00148 427 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 PSMD7P51665 324 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 ICA1LQ8NDH6 482 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 SLC17A8Q8NDX2 589 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 PYROXD1Q8WU10 500 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 SDR42E1Q8WUS8 393 aa15.74■□□□□ 0.11
SMARCA4-214ENST00000589677 hCG_1984214I3L0E3 225 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 GSTA1P08263 222 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 GSTA2P09210 222 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 NCF2P19878 526 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 ADD2P35612 726 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 SRRM1Q8IYB3 904 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 ZNF713Q8N859 430 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 ORC6Q9Y5N6 252 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 ZCCHC11Q5TAX3 1644 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 RFX7Q2KHR2 1363 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 NCK2O43639 380 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 ARFIP2P53365 341 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 TRIP13Q15645 432 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 CDC37Q16543 378 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 SESTD1Q86VW0 696 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 RFX6Q8HWS3 928 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 ZNF711Q9Y462 761 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 USP15Q9Y4E8 981 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 INPP1P49441 399 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 GFPT1Q06210 699 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 PPP2R5CQ13362 524 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 PTGISQ16647 500 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 FSCBQ5H9T9 825 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 TMEM154Q6P9G4 183 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 TRIM50Q86XT4 487 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 MAPKAPK5Q8IW41 473 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 PDIK1LQ8N165 341 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 SH2D3CQ8N5H7 860 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 TGFBRAP1Q8WUH2 860 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 OSBP2Q969R2 916 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 IRX2Q9BZI1 471 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 EDEM3Q9BZQ6 932 aa15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-214ENST00000589677 CHD1O14646 1710 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 CCT8L1PA6NM43 557 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 PYGBP11216 843 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 DHX34Q14147 1143 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 TSGA10IPQ3SY00 556 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 TAB3Q8N5C8 712 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 LIMA1Q9UHB6 759 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 PSMD14O00487 310 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 KCNQ3O43525 872 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 KRT37O76014 449 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 TEDDM1Q5T9Z0 273 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 FAM161BQ96MY7 647 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 XPO6Q96QU8 1125 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 TRIM15Q9C019 465 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 APOBEC2Q9Y235 224 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 SLC4A7Q9Y6M7 1214 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 EIF4E1BA6NMX2 242 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 KRT1P04264 644 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 ZFXP17010 805 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 CYB5D1Q6P9G0 228 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 RNF207Q6ZRF8 634 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 MRPL40Q9NQ50 206 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 ATG3Q9NT62 314 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 TRAF3IP3Q9Y228 551 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 MCF2LO15068 1137 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 MAN1A2O60476 641 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 HSPA8P11142 646 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 RGS9BPQ6ZS82 235 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 TRPM8Q7Z2W7 1104 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 KIFC3Q9BVG8 833 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 DDX47Q9H0S4 455 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 NOD2Q9HC29 1040 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 CD248Q9HCU0 757 aa15.72■□□□□ 0.11
SMARCA4-214ENST00000589677 PRCPP42785 496 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 TMPRSS15P98073 1019 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 USH1GQ495M9 461 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 SCYL2Q6P3W7 929 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 ORAI2Q96SN7 254 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 SAYSD1Q9NPB0 183 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 CFBP00751 764 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 STAT2P52630 851 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 UNC13DQ70J99 1090 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 SUGP1Q8IWZ8 645 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 DNAJC9Q8WXX5 260 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 CFAP65Q6ZU64 1925 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 FOSP01100 380 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 KRT19P08727 400 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 ECE1P42892 770 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 ODR4Q5SWX8 454 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 NSMCE1Q8WV22 266 aa15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 RIN2Q8WYP3 895 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-214ENST00000589677 COPEO14579 308 aa15.71■□□□□ 0.1
SMARCA4-214ENST00000589677 NVLO15381 856 aaKnown RBP15.71■□□□□ 0.1
SMARCA4-214ENST00000589677 CFLARO15519 480 aa15.71■□□□□ 0.1
SMARCA4-214ENST00000589677 SASH1O94885 1247 aa15.71■□□□□ 0.1
SMARCA4-214ENST00000589677 KLHL38Q2WGJ6 581 aa15.71■□□□□ 0.1
SMARCA4-214ENST00000589677 WDR93Q6P2C0 686 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms