RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PSMC5P62195 406 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 MFSD10Q14728 455 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 SNX17Q15036 470 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 SLC39A14Q15043 492 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 KIAA0753Q2KHM9 967 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 UTP14CQ5TAP6 766 aaKnown RBP10.19□□□□□ -0.78
CIRBP-218ENST00000588344 HAUS3Q68CZ6 603 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 NCAPH2Q6IBW4 605 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 ANKRD33Q7Z3H0 272 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 C7orf31Q8N865 590 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 SLC43A3Q8NBI5 491 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 KCNG4Q8TDN1 519 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 KAT2BQ92831 832 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 ZSWIM4Q9H7M6 989 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 GABBR1Q9UBS5 961 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 LRWD1Q9UFC0 647 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 PPME1Q9Y570 386 aa10.19□□□□□ -0.78
CIRBP-218ENST00000588344 NRCAMQ92823 1304 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 LCTP09848 1927 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 DCDC2CA8MYV0 355 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 WNT7AO00755 349 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 TLR3O15455 904 aaKnown RBP10.18□□□□□ -0.78
CIRBP-218ENST00000588344 HBP1O60381 514 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 PTGS1P23219 599 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 KRT85P78386 507 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
CIRBP-218ENST00000588344 SPIRE1Q08AE8 756 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 PKP1Q13835 747 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 NBR1Q14596 966 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 STK38Q15208 465 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 ZNF484Q5JVG2 852 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 KRT79Q5XKE5 535 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 OTUD6AQ7L8S5 288 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 C4orf19Q8IY42 314 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 CKAP2LQ8IYA6 745 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 EXOC8Q8IYI6 725 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 IGSF22Q8N9C0 903 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
CIRBP-218ENST00000588344 HSD17B14Q9BPX1 270 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 POLR3CQ9BUI4 534 aaPredicted RBP10.18□□□□□ -0.78
CIRBP-218ENST00000588344 SCAND2PQ9GZW5 306 aaPredicted RBP10.18□□□□□ -0.78
CIRBP-218ENST00000588344 TUFT1Q9NNX1 390 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 CHMP5Q9NZZ3 219 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 ZDHHC9Q9Y397 364 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 SRPRBQ9Y5M8 271 aaKnown RBP10.18□□□□□ -0.78
CIRBP-218ENST00000588344 BRCA2P51587 3418 aa10.18□□□□□ -0.78
CIRBP-218ENST00000588344 LRRC37A2A6NM11 1700 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 EML1O00423 815 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 SLITRK3O94933 977 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 LYPLA2O95372 231 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 ZNF286BP0CG31 522 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 RPA1P27694 616 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 PTPAQ15257 358 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 XKR3Q5GH77 459 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 FOXD4L5Q5VV16 416 aaPredicted RBP10.17□□□□□ -0.78
CIRBP-218ENST00000588344 FAM173BQ6P4H8 233 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 CCDC60Q8IWA6 550 aaPredicted RBP10.17□□□□□ -0.78
CIRBP-218ENST00000588344 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
CIRBP-218ENST00000588344 LINC00301Q8NCQ3 95 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 DIS3LQ8TF46 1054 aaKnown RBP10.17□□□□□ -0.78
CIRBP-218ENST00000588344 ATP8B4Q8TF62 1192 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 FOXD4L4Q8WXT5 416 aaPredicted RBP10.17□□□□□ -0.78
CIRBP-218ENST00000588344 GJA10Q969M2 543 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 UIMC1Q96RL1 719 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 USP28Q96RU2 1077 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 PCYT2Q99447 389 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 EIF2AK1Q9BQI3 630 aaKnown RBP10.17□□□□□ -0.78
CIRBP-218ENST00000588344 RCOR1Q9UKL0 485 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 CLIC4Q9Y696 253 aa10.17□□□□□ -0.78
CIRBP-218ENST00000588344 COL1A2P08123 1366 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 GRIN2DO15399 1336 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 C17orf102A2RUQ5 167 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 VWA3AA6NCI4 1184 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 SPTLC2O15270 562 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 MAGEB2O15479 319 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 OATP04181 439 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 SMIM10L2AP0DMW4 78 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 SMIM10L2BP0DMW5 78 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 UBA7P41226 1012 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 ATN1P54259 1190 aaPredicted RBP10.16□□□□□ -0.78
CIRBP-218ENST00000588344 CHMP4BP1P59074 171 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 PSMC6P62333 389 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 PLCB4Q15147 1175 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 CSPP1Q1MSJ5 1256 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 FAM47CQ5HY64 1035 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 TPH2Q8IWU9 490 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 ZNF710Q8N1W2 664 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
CIRBP-218ENST00000588344 NACC1Q96RE7 527 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
CIRBP-218ENST00000588344 NIFKQ9BYG3 293 aaKnown RBP10.16□□□□□ -0.78
CIRBP-218ENST00000588344 NT5C3AQ9H0P0 336 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 RNPEPQ9H4A4 650 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 ANKEF1Q9NU02 776 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 TFIP11Q9UBB9 837 aaKnown RBP10.16□□□□□ -0.78
CIRBP-218ENST00000588344 GTF2IRD1Q9UHL9 959 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms