RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PPFIA3O75145 1194 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 POLR2MP0CAP2 368 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 SP100P23497 879 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 ADAM17P78536 824 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 RBM10P98175 930 aaKnown RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 MGAT3Q09327 533 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 NMIQ13287 307 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 HDAC1Q13547 482 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 NEDD9Q14511 834 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 GNPTABQ3T906 1256 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 NAALADL2Q58DX5 795 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 CCDC178Q5BJE1 867 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 TAF2Q6P1X5 1199 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 TSHZ1Q6ZSZ6 1077 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 RSPH3Q86UC2 560 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 ENAHQ8N8S7 591 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 MICAL1Q8TDZ2 1067 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 ZSCAN10Q96SZ4 725 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 TLE6Q9H808 572 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 EHMT1Q9H9B1 1298 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 MAP3K20Q9NYL2 800 aaKnown RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 ZBTB47Q9UFB7 747 aaPredicted RBP9.9□□□□□ -0.82
SDF2-204ENST00000587338 TELO2Q9Y4R8 837 aa9.9□□□□□ -0.82
SDF2-204ENST00000587338 PLXNA3P51805 1871 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 EPG5Q9HCE0 2579 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 PRR23AA6NEV1 266 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 B4E1Z4 1266 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 PROB1E7EW31 1015 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 ZNF213O14771 459 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 ZBTB5O15062 677 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 GALR2O43603 387 aaPredicted RBP9.89□□□□□ -0.83
SDF2-204ENST00000587338 ATF7P17544 494 aaPredicted RBP9.89□□□□□ -0.83
SDF2-204ENST00000587338 CD52P31358 61 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 PPFIA1Q13136 1202 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 SEMA3FQ13275 785 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 FBXO47Q5MNV8 452 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 HOMER1Q86YM7 354 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 NPAS4Q8IUM7 802 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 STAG2Q8N3U4 1231 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 TUBE1Q9UJT0 475 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 CDY2AQ9Y6F7 541 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 EP300Q09472 2414 aaPredicted RBP9.89□□□□□ -0.83
SDF2-204ENST00000587338 NCOR2Q9Y618 2525 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
SDF2-204ENST00000587338 SALL3Q9BXA9 1300 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 KLRF2D3W0D1 207 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 FIBPO43427 364 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 STAG3L1P0CL83 205 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 SCG2P13521 617 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 MARK3P27448 753 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 GATMP50440 423 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 MRPS9P82933 396 aaKnown RBP9.88□□□□□ -0.83
SDF2-204ENST00000587338 GRIK4Q16099 956 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 SPOUT1Q5T280 376 aaKnown RBP9.88□□□□□ -0.83
SDF2-204ENST00000587338 SAMD3Q8N6K7 520 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 VN1R2Q8NFZ6 395 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 DNAJB3Q8WWF6 145 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 SUSD6Q92537 303 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 RIPOR3Q96MK2 946 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 INPP4AQ96PE3 977 aaPredicted RBP9.88□□□□□ -0.83
SDF2-204ENST00000587338 NEK1Q96PY6 1258 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 UBAC1Q9BSL1 405 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 APOL5Q9BWW9 433 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 FAM49AQ9H0Q0 323 aaPredicted RBP9.88□□□□□ -0.83
SDF2-204ENST00000587338 AGO3Q9H9G7 860 aaKnown RBP9.88□□□□□ -0.83
SDF2-204ENST00000587338 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 RTEL1Q9NZ71 1219 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 TRPC6Q9Y210 931 aa9.88□□□□□ -0.83
SDF2-204ENST00000587338 DOCK5Q9H7D0 1870 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 SPATA31C2B4DYI2 1134 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 SRGAP2BP0DMP2 458 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 TCF7P36402 384 aaPredicted RBP9.87□□□□□ -0.83
SDF2-204ENST00000587338 NUBP1P53384 320 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 MFAP1P55081 439 aaKnown RBP9.87□□□□□ -0.83
SDF2-204ENST00000587338 IGBP1P78318 339 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 MRPS6P82932 125 aaKnown RBP9.87□□□□□ -0.83
SDF2-204ENST00000587338 DUSP6Q16828 381 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 IFIT1BQ5T764 474 aaKnown RBP9.87□□□□□ -0.83
SDF2-204ENST00000587338 ANKRD45Q5TZF3 282 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 ERMP1Q7Z2K6 904 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 SKAP1Q86WV1 359 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 KREMEN2Q8NCW0 462 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 ATP8B4Q8TF62 1192 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 ZBTB10Q96DT7 871 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 MTMR8Q96EF0 704 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 LRFN2Q9ULH4 789 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 PCDHB12Q9Y5F1 795 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 KAT6AQ92794 2004 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 CACNA1BQ00975 2339 aa9.87□□□□□ -0.83
SDF2-204ENST00000587338 FRMPD4Q14CM0 1322 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 FSD2A1L4K1 749 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 MBLAC1A4D2B0 266 aaPredicted RBP9.86□□□□□ -0.83
SDF2-204ENST00000587338 M0QZ92 97 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 STAM2O75886 525 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 NBL1P41271 181 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 TECP42680 631 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 ID4P47928 161 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 NT5C2P49902 561 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms