RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 MMP1P03956 469 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 CD52P31358 61 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 NHLH1Q02575 133 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 ADGRD2Q7Z7M1 963 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 ZNF654Q8IZM8 581 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 MSLNLQ96KJ4 702 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 ALG13Q9NP73 1137 aaKnown RBP13.68□□□□□ -0.22
BRCA1-225ENST00000586385 PKD2L1Q9P0L9 805 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 MUTYHQ9UIF7 546 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 TTC3P53804 2025 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 hCG_1642624A0A1W2PR95 340 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 ERICH2A1L162 156 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 NCK2O43639 380 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 DDAH1O94760 285 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 ITGB1P05556 798 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 MRPS6P82932 125 aaKnown RBP13.67□□□□□ -0.22
BRCA1-225ENST00000586385 ADAM15Q13444 863 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 BTG3Q14201 252 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-225ENST00000586385 UBE2SQ16763 222 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-225ENST00000586385 TSHZ1Q6ZSZ6 1077 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 RALYLQ86SE5 291 aaKnown RBP13.67□□□□□ -0.22
BRCA1-225ENST00000586385 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 MAP4K1Q92918 833 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
BRCA1-225ENST00000586385 ERAP1Q9NZ08 941 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 CLEC1BQ9P126 229 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 PCDHGC5Q9Y5F6 944 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 ZNF318Q5VUA4 2279 aa13.67□□□□□ -0.22
BRCA1-225ENST00000586385 TECTAO75443 2155 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 INSRRP14616 1297 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 RXRAP19793 462 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 MRE11P49959 708 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 GATMP50440 423 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 IGBP1P78318 339 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 SMAD4Q13485 552 aaKnown RBP13.66□□□□□ -0.22
BRCA1-225ENST00000586385 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
BRCA1-225ENST00000586385 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 RNF135Q8IUD6 432 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 GIMAP8Q8ND71 665 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-225ENST00000586385 TRAPPC12Q8WVT3 735 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 CUL5Q93034 780 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 FAM49AQ9H0Q0 323 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-225ENST00000586385 TMX1Q9H3N1 280 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 IGFLR1Q9H665 355 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 PSTPIP2Q9H939 334 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 FAM50BQ9Y247 325 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 RWDD3Q9Y3V2 267 aa13.66□□□□□ -0.22
BRCA1-225ENST00000586385 SH2B2O14492 632 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-225ENST00000586385 EYA4O95677 639 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 GLP2RO95838 553 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 TMEM62Q0P6H9 643 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 MTMR1Q13613 665 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 RAB11FIP4Q86YS3 637 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 CMTR2Q8IYT2 770 aaKnown RBP13.65□□□□□ -0.22
BRCA1-225ENST00000586385 CTCFLQ8NI51 663 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-225ENST00000586385 CYP2W1Q8TAV3 490 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 GLG1Q92896 1179 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 P2RX5Q93086 422 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 SMARCAD1Q9H4L7 1026 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 CD207Q9UJ71 328 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 RBM8AQ9Y5S9 174 aaKnown RBP13.65□□□□□ -0.22
BRCA1-225ENST00000586385 C5orf42Q9H799 3197 aa13.65□□□□□ -0.22
BRCA1-225ENST00000586385 PRC1O43663 620 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 MGEA5O60502 916 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 KIF5BP33176 963 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 PLCB4Q15147 1175 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 PAN2Q504Q3 1202 aaKnown RBP13.64□□□□□ -0.23
BRCA1-225ENST00000586385 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 RSPH3Q86UC2 560 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 RUFY2Q8WXA3 655 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 CDHR1Q96JP9 859 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 PADI3Q9ULW8 664 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 TRPV2Q9Y5S1 764 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
BRCA1-225ENST00000586385 STXBP3O00186 592 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 RBM10P98175 930 aaKnown RBP13.63□□□□□ -0.23
BRCA1-225ENST00000586385 ITGB3BPQ13352 177 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-225ENST00000586385 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 POF1BQ8WVV4 589 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
BRCA1-225ENST00000586385 KCNH6Q9H252 994 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 CDHR5Q9HBB8 845 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 JPH1Q9HDC5 661 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-225ENST00000586385 KCNH7Q9NS40 1196 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms