RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 TCEAL9Q9UHQ7 104 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 MEIS1O00470 390 aa26.16■■□□□ 1.78
LSM7-202ENST00000585395 ACRP10323 421 aa26.16■■□□□ 1.78
LSM7-202ENST00000585395 HOXD8P13378 290 aaPredicted RBP26.16■■□□□ 1.78
LSM7-202ENST00000585395 GCFC2P16383 781 aaKnown RBP26.16■■□□□ 1.78
LSM7-202ENST00000585395 LARP1BQ659C4 914 aaKnown RBP26.16■■□□□ 1.78
LSM7-202ENST00000585395 GDF6Q6KF10 455 aaPredicted RBP26.16■■□□□ 1.78
LSM7-202ENST00000585395 SESTD1Q86VW0 696 aa26.16■■□□□ 1.78
LSM7-202ENST00000585395 RPUSD2Q8IZ73 545 aaKnown RBP26.16■■□□□ 1.78
LSM7-202ENST00000585395 GPR20Q99678 358 aa26.16■■□□□ 1.78
LSM7-202ENST00000585395 SDF4Q9BRK5 362 aa26.16■■□□□ 1.78
LSM7-202ENST00000585395 MTIF3Q9H2K0 278 aaKnown RBP26.16■■□□□ 1.78
LSM7-202ENST00000585395 IL23AQ9NPF7 189 aa26.16■■□□□ 1.78
LSM7-202ENST00000585395 GTF2IRD1Q9UHL9 959 aa26.16■■□□□ 1.78
LSM7-202ENST00000585395 ARIH1Q9Y4X5 557 aaPredicted RBP26.16■■□□□ 1.78
LSM7-202ENST00000585395 BTBD18B2RXH4 712 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 H3BRB1 525 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 ADAMTS3O15072 1205 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 INF2Q27J81 1249 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 OXER1Q8TDS5 423 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 HERVK_113Q902F9 699 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 SCLYQ96I15 445 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 TUT1Q9H6E5 874 aaKnown RBP26.15■■□□□ 1.78
LSM7-202ENST00000585395 SLC28A3Q9HAS3 691 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 KCNH7Q9NS40 1196 aa26.15■■□□□ 1.78
LSM7-202ENST00000585395 REV3LO60673 3130 aa26.14■■□□□ 1.78
LSM7-202ENST00000585395 KCNA2P16389 499 aa26.14■■□□□ 1.78
LSM7-202ENST00000585395 NR5A1Q13285 461 aa26.14■■□□□ 1.78
LSM7-202ENST00000585395 WNT8AQ9H1J5 351 aa26.14■■□□□ 1.78
LSM7-202ENST00000585395 XIRP2A4UGR9 3374 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 HAS3O00219 553 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 ATP9AO75110 1047 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 PDIA4P13667 645 aaKnown RBP26.13■■□□□ 1.77
LSM7-202ENST00000585395 AAK1Q2M2I8 961 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 LETM2Q2VYF4 491 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 PRR16Q569H4 304 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 CAGE1Q8TC20 777 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 C16orf70Q9BSU1 422 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 JPH1Q9HDC5 661 aaPredicted RBP26.13■■□□□ 1.77
LSM7-202ENST00000585395 NOL7Q9UMY1 257 aaKnown RBP26.13■■□□□ 1.77
LSM7-202ENST00000585395 NFASCO94856 1347 aa26.13■■□□□ 1.77
LSM7-202ENST00000585395 TRANK1O15050 2925 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 CYP3A7-CYP3A51PA0A087WV96 503 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 C17orf102A2RUQ5 167 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 FAM86B1E9PN63 330 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 FGBP02675 491 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 FAM86B2P0C5J1 330 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 BMP1P13497 986 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 CYP3A7P24462 503 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 TCF7P36402 384 aaPredicted RBP26.12■■□□□ 1.77
LSM7-202ENST00000585395 DEFB128Q7Z7B8 93 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 TRIM50Q86XT4 487 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 SEPT1Q8WYJ6 367 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 TNFRSF25Q93038 417 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 NKX2-4Q9H2Z4 354 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 TBC1D22BQ9NU19 505 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 SLC9A2Q9UBY0 812 aa26.12■■□□□ 1.77
LSM7-202ENST00000585395 TRIP12Q14669 1992 aaPredicted RBP26.12■■□□□ 1.77
LSM7-202ENST00000585395 KAT6AQ92794 2004 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 PITPNM1O00562 1244 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 Q4G0T1 1027 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 MCTP1Q6DN14 999 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 PPP4R3AQ6IN85 833 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 NOSTRINQ8IVI9 506 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 CYP2W1Q8TAV3 490 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 GLG1Q92896 1179 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 ZNF577Q9BSK1 485 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 AGO4Q9HCK5 861 aaKnown RBP26.11■■□□□ 1.77
LSM7-202ENST00000585395 TANC1Q9C0D5 1861 aa26.11■■□□□ 1.77
LSM7-202ENST00000585395 IGLV3-22A0A075B6J6 115 aa26.1■■□□□ 1.77
LSM7-202ENST00000585395 SMIM10L2AP0DMW4 78 aa26.1■■□□□ 1.77
LSM7-202ENST00000585395 SMIM10L2BP0DMW5 78 aa26.1■■□□□ 1.77
LSM7-202ENST00000585395 FTOQ9C0B1 505 aaKnown RBP eCLIP26.1■■□□□ 1.77
LSM7-202ENST00000585395 DDX25Q9UHL0 483 aaKnown RBP26.1■■□□□ 1.77
LSM7-202ENST00000585395 ZBBXA8MT70 800 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 IPO5O00410 1097 aaKnown RBP26.09■■□□□ 1.77
LSM7-202ENST00000585395 MARCH6O60337 910 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 CCNT1O60563 726 aaKnown RBP26.09■■□□□ 1.77
LSM7-202ENST00000585395 PFKMP08237 780 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 ARP10275 920 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 GNAT1P11488 350 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 RFC2P35250 354 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 TRAPPC10P48553 1259 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 PTK7Q13308 1070 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 OTOP2Q7RTS6 562 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 AFAP1L1Q8TED9 768 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 ATP6V0A1Q93050 837 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 AZI2Q9H6S1 392 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 SCN5AQ14524 2016 aa26.09■■□□□ 1.77
LSM7-202ENST00000585395 GBF1Q92538 1859 aa26.08■■□□□ 1.77
LSM7-202ENST00000585395 TCF20Q9UGU0 1960 aaKnown RBP26.08■■□□□ 1.77
LSM7-202ENST00000585395 DDX39AO00148 427 aaKnown RBP26.08■■□□□ 1.77
LSM7-202ENST00000585395 ACTN1P12814 892 aa26.08■■□□□ 1.77
LSM7-202ENST00000585395 U2AF2P26368 475 aaKnown RBP eCLIP26.08■■□□□ 1.77
LSM7-202ENST00000585395 ZNF200P98182 395 aaPredicted RBP26.08■■□□□ 1.77
LSM7-202ENST00000585395 ORC2Q13416 577 aaPredicted RBP26.08■■□□□ 1.77
LSM7-202ENST00000585395 MBOAT7Q96N66 472 aa26.08■■□□□ 1.77
LSM7-202ENST00000585395 NECAB3Q96P71 396 aaPredicted RBP26.08■■□□□ 1.77
LSM7-202ENST00000585395 YBX2Q9Y2T7 364 aaKnown RBP26.08■■□□□ 1.77
LSM7-202ENST00000585395 TELO2Q9Y4R8 837 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms