RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SWSAP1Q6NVH7 229 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 B3GNT9Q6UX72 402 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 KCNG4Q8TDN1 519 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 AFAP1L1Q8TED9 768 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 DIS3LQ8TF46 1054 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 FAM167AQ96KS9 214 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 FTOQ9C0B1 505 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 TUT1Q9H6E5 874 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 TFIP11Q9UBB9 837 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 GABBR1Q9UBS5 961 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 LRWD1Q9UFC0 647 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 IGKV6D-21A0A0A0MT36 114 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 SPTLC2O15270 562 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 SPIRE1Q08AE8 756 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 ITGA7Q13683 1181 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 PTPAQ15257 358 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 KIAA0753Q2KHM9 967 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 TRIM50Q86XT4 487 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 AK8Q96MA6 479 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 C16orf70Q9BSU1 422 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 SCAND2PQ9GZW5 306 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 TELO2Q9Y4R8 837 aa16.38■□□□□ 0.21
SCAMP4-209ENST00000585335 POTEMA6NI47 508 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 EML1O00423 815 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 PPP6R2O75170 966 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 COL6A1P12109 1028 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 LONP1P36776 959 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 MNX1P50219 401 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 PSMC5P62195 406 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 KRT79Q5XKE5 535 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 NFRKBQ6P4R8 1299 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 CCDC60Q8IWA6 550 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 C7orf31Q8N865 590 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 IGSF22Q8N9C0 903 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 KRI1Q8N9T8 703 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 LINC00301Q8NCQ3 95 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 EIF2AK1Q9BQI3 630 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 TRPC6Q9Y210 931 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 MAFBQ9Y5Q3 323 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 MROH7Q68CQ1 1323 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 IGSF9BQ9UPX0 1349 aa16.37■□□□□ 0.21
SCAMP4-209ENST00000585335 HAS3O00219 553 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 GNAT1P11488 350 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 MARK3P27448 753 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 PSMC6P62333 389 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 PTPN11Q06124 597 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 NBPF20Q3BBV1 942 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 BANK1Q8NDB2 785 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 KAT2BQ92831 832 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 PCYT2Q99447 389 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 HTATIP2Q9BUP3 242 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 TUFT1Q9NNX1 390 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 NRBP2Q9NSY0 501 aa16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 SRPRBQ9Y5M8 271 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-209ENST00000585335 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 ARVCFO00192 962 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 TLR3O15455 904 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 SLC26A4O43511 780 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 CAPN15O75808 1086 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 MUTP22033 750 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 TXLNAP40222 546 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 CCT6AP40227 531 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 UBA7P41226 1012 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 ME1P48163 572 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 ATN1P54259 1190 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 PRKCEQ02156 737 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 CSPP1Q1MSJ5 1256 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 SLC39A5Q6ZMH5 540 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 UBE2Q1Q7Z7E8 422 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 TPH2Q8IWU9 490 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 RASSF8Q8NHQ8 419 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 SNX29Q8TEQ0 813 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 ATP8B4Q8TF62 1192 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 DYDC2Q96IM9 177 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 CDK5RAP3Q96JB5 506 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 CCDC43Q96MW1 224 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 LXNQ9BS40 222 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 POLR3CQ9BUI4 534 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 FBXO2Q9UK22 296 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 KDM3AQ9Y4C1 1321 aa16.35■□□□□ 0.21
SCAMP4-209ENST00000585335 HBP1O60381 514 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 OATP04181 439 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 SMIM10L2AP0DMW4 78 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 SMIM10L2BP0DMW5 78 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 RPA1P27694 616 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 CYP4A11Q02928 519 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 PPFIA1Q13136 1202 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 PLCB4Q15147 1175 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 IL17AQ16552 155 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 XKR3Q5GH77 459 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 OTUD6AQ7L8S5 288 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms