RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 A0A0G2JND7 137 aa14.04□□□□□ -0.16
RNF43-208ENST00000584437 TMEM232C9JQI7 657 aa14.04□□□□□ -0.16
RNF43-208ENST00000584437 TLR3O15455 904 aaKnown RBP14.04□□□□□ -0.16
RNF43-208ENST00000584437 TRIP13Q15645 432 aaPredicted RBP14.04□□□□□ -0.16
RNF43-208ENST00000584437 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
RNF43-208ENST00000584437 KCTD6Q8NC69 237 aa14.04□□□□□ -0.16
RNF43-208ENST00000584437 ATP6V1E2Q96A05 226 aa14.04□□□□□ -0.16
RNF43-208ENST00000584437 GRAMD1AQ96CP6 724 aa14.04□□□□□ -0.16
RNF43-208ENST00000584437 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
RNF43-208ENST00000584437 MAGI2Q86UL8 1455 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 ARHGAP10A1A4S6 786 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 RASA4BC9J798 803 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 COPEO14579 308 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 RASA4O43374 803 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 TOM1O60784 492 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 HAUS5O94927 633 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 THOC5Q13769 683 aaKnown RBP14.03□□□□□ -0.16
RNF43-208ENST00000584437 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 LRRC37BQ96QE4 947 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 ADGRG1Q9Y653 693 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 ARL4CP56559 192 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 TNFAIP1Q13829 316 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 COG1Q8WTW3 980 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 KMT5AQ9NQR1 393 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 GINM1Q9NU53 330 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 APOBEC2Q9Y235 224 aaKnown RBP14.03□□□□□ -0.16
RNF43-208ENST00000584437 SNX24Q9Y343 169 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 H0Y3Z8 333 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 MCF2P10911 925 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 KCNJ6P48051 423 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 TMPRSS15P98073 1019 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 CAPRIN2Q6IMN6 1127 aaKnown RBP14.03□□□□□ -0.16
RNF43-208ENST00000584437 CHMP6Q96FZ7 201 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 CALN1Q9BXU9 219 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 H0YIN7 160 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 GOLGA8SH3BPF8 625 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 TJP3O95049 919 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 EPM2AIP1Q7L775 607 aaPredicted RBP14.03□□□□□ -0.16
RNF43-208ENST00000584437 SH3GLB2Q9NR46 395 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 KLC4Q9NSK0 619 aa14.03□□□□□ -0.16
RNF43-208ENST00000584437 RPAP1Q9BWH6 1393 aaPredicted RBP14.02□□□□□ -0.16
RNF43-208ENST00000584437 PMS2P54278 862 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 AP2B1P63010 937 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 MKRN3Q13064 507 aaKnown RBP14.02□□□□□ -0.16
RNF43-208ENST00000584437 SIRT2Q8IXJ6 389 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 FMR1NBQ8N0W7 255 aaPredicted RBP14.02□□□□□ -0.16
RNF43-208ENST00000584437 CCNYQ8ND76 341 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 SUGCTQ9HAC7 445 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 MAP3K15Q6ZN16 1313 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 DYNLT1P63172 113 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 HDLBPQ00341 1268 aaKnown RBP14.02□□□□□ -0.16
RNF43-208ENST00000584437 KLHL38Q2WGJ6 581 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 CEP19Q96LK0 163 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 TAF1DQ9H5J8 278 aaPredicted RBP14.02□□□□□ -0.16
RNF43-208ENST00000584437 SAYSD1Q9NPB0 183 aa14.02□□□□□ -0.16
RNF43-208ENST00000584437 KRT38O76015 456 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 TTLL1O95922 423 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 UNC13DQ70J99 1090 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 BZW1Q7L1Q6 419 aaKnown RBP14.02□□□□□ -0.17
RNF43-208ENST00000584437 SRLQ86TD4 932 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 OSBPL9Q96SU4 736 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 VIPAS39Q9H9C1 493 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 SLC24A3Q9HC58 644 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 GJA3Q9Y6H8 435 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 STK36Q9NRP7 1315 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 RASSF10A6NK89 507 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 CCDC144BQ3MJ40 725 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 STAMBPL1Q96FJ0 436 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 RBM41Q96IZ5 413 aaKnown RBP14.02□□□□□ -0.17
RNF43-208ENST00000584437 PGBD1Q96JS3 809 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 FGD4Q96M96 766 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 GREM2Q9H772 168 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 PTCH1Q13635 1447 aa14.02□□□□□ -0.17
RNF43-208ENST00000584437 FAM187AA6NFU0 413 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 PRPSAP2O60256 369 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 SRGAP2O75044 1071 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 HSPA4LO95757 839 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.01□□□□□ -0.17
RNF43-208ENST00000584437 OSBP2Q969R2 916 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 CFAP36Q96G28 342 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 SH3GL3Q99963 347 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
RNF43-208ENST00000584437 SLC38A10Q9HBR0 1119 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 ZSWIM5Q9P217 1185 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 CCPG1Q9ULG6 757 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 CHEK2O96017 543 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 ACTN3Q08043 901 aaPredicted RBP14.01□□□□□ -0.17
RNF43-208ENST00000584437 C1orf146Q5VVC0 180 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 RNF207Q6ZRF8 634 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 TTC13Q8NBP0 860 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 SLC7A3Q8WY07 619 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 DYDC2Q96IM9 177 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 PUS3Q9BZE2 481 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms