RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 MICAL3Q7RTP6 2002 aa28.28■■■□□ 2.12
TSEN54-209ENST00000583454 MEIS1O00470 390 aa28.28■■■□□ 2.12
TSEN54-209ENST00000583454 PTK7Q13308 1070 aa28.28■■■□□ 2.12
TSEN54-209ENST00000583454 NEDD9Q14511 834 aa28.28■■■□□ 2.12
TSEN54-209ENST00000583454 MBTPS1Q14703 1052 aa28.28■■■□□ 2.12
TSEN54-209ENST00000583454 CYP2W1Q8TAV3 490 aa28.28■■■□□ 2.12
TSEN54-209ENST00000583454 SYMPKQ92797 1274 aaKnown RBP28.28■■■□□ 2.12
TSEN54-209ENST00000583454 THEGQ9P2T0 379 aa28.28■■■□□ 2.12
TSEN54-209ENST00000583454 RFXAPO00287 272 aa28.27■■■□□ 2.12
TSEN54-209ENST00000583454 WDR5P61964 334 aaKnown RBP28.27■■■□□ 2.12
TSEN54-209ENST00000583454 TAP1Q03518 808 aa28.27■■■□□ 2.12
TSEN54-209ENST00000583454 MTMR1Q13613 665 aa28.27■■■□□ 2.12
TSEN54-209ENST00000583454 NIPA1Q7RTP0 329 aa28.27■■■□□ 2.12
TSEN54-209ENST00000583454 ATXN2LQ8WWM7 1075 aaKnown RBP28.27■■■□□ 2.12
TSEN54-209ENST00000583454 TMX3Q96JJ7 454 aa28.27■■■□□ 2.12
TSEN54-209ENST00000583454 EDIL3O43854 480 aa28.26■■■□□ 2.11
TSEN54-209ENST00000583454 ATP9AO75110 1047 aa28.26■■■□□ 2.11
TSEN54-209ENST00000583454 KCNA2P16389 499 aa28.26■■■□□ 2.11
TSEN54-209ENST00000583454 POU3F3P20264 500 aaPredicted RBP28.26■■■□□ 2.11
TSEN54-209ENST00000583454 HOXC8P31273 242 aa28.26■■■□□ 2.11
TSEN54-209ENST00000583454 SPRED2Q7Z698 418 aa28.26■■■□□ 2.11
TSEN54-209ENST00000583454 GIMAP8Q8ND71 665 aaPredicted RBP28.26■■■□□ 2.11
TSEN54-209ENST00000583454 MLXIPQ9HAP2 919 aa28.26■■■□□ 2.11
TSEN54-209ENST00000583454 KCNH7Q9NS40 1196 aa28.26■■■□□ 2.11
TSEN54-209ENST00000583454 PARNO95453 639 aaKnown RBP28.25■■■□□ 2.11
TSEN54-209ENST00000583454 CIITAP33076 1130 aa28.25■■■□□ 2.11
TSEN54-209ENST00000583454 DEFB103AP81534 67 aa28.25■■■□□ 2.11
TSEN54-209ENST00000583454 ZNF618Q5T7W0 954 aa28.25■■■□□ 2.11
TSEN54-209ENST00000583454 CNKSR3Q6P9H4 555 aa28.25■■■□□ 2.11
TSEN54-209ENST00000583454 METTL7BQ6UX53 244 aa28.25■■■□□ 2.11
TSEN54-209ENST00000583454 TMCO2Q7Z6W1 182 aaPredicted RBP28.25■■■□□ 2.11
TSEN54-209ENST00000583454 CERS4Q9HA82 394 aa28.25■■■□□ 2.11
TSEN54-209ENST00000583454 FAM86B1E9PN63 330 aa28.24■■■□□ 2.11
TSEN54-209ENST00000583454 FAM86B2P0C5J1 330 aa28.24■■■□□ 2.11
TSEN54-209ENST00000583454 ZNF76P36508 570 aa28.24■■■□□ 2.11
TSEN54-209ENST00000583454 USP11P51784 963 aa28.24■■■□□ 2.11
TSEN54-209ENST00000583454 HMGN5P82970 282 aaKnown RBP28.24■■■□□ 2.11
TSEN54-209ENST00000583454 CYFIP1Q7L576 1253 aa28.24■■■□□ 2.11
TSEN54-209ENST00000583454 ASB2Q96Q27 587 aa28.24■■■□□ 2.11
TSEN54-209ENST00000583454 IGLV3-22A0A075B6J6 115 aa28.23■■■□□ 2.11
TSEN54-209ENST00000583454 LCHNA4D1U4 455 aa28.23■■■□□ 2.11
TSEN54-209ENST00000583454 ARP10275 920 aa28.23■■■□□ 2.11
TSEN54-209ENST00000583454 SERINC5Q86VE9 423 aa28.23■■■□□ 2.11
TSEN54-209ENST00000583454 TELO2Q9Y4R8 837 aa28.23■■■□□ 2.11
TSEN54-209ENST00000583454 MTCH2Q9Y6C9 303 aa28.23■■■□□ 2.11
TSEN54-209ENST00000583454 SIP14410 1827 aa28.22■■■□□ 2.11
TSEN54-209ENST00000583454 LGALS2P05162 132 aa28.22■■■□□ 2.11
TSEN54-209ENST00000583454 KCNJ6P48051 423 aa28.22■■■□□ 2.11
TSEN54-209ENST00000583454 MKRN4PQ13434 485 aaPredicted RBP28.22■■■□□ 2.11
TSEN54-209ENST00000583454 KRT25Q7Z3Z0 450 aa28.22■■■□□ 2.11
TSEN54-209ENST00000583454 OXER1Q8TDS5 423 aa28.22■■■□□ 2.11
TSEN54-209ENST00000583454 TBCKQ8TEA7 893 aa28.22■■■□□ 2.11
TSEN54-209ENST00000583454 AGO4Q9HCK5 861 aaKnown RBP28.22■■■□□ 2.11
TSEN54-209ENST00000583454 TCF20Q9UGU0 1960 aaKnown RBP28.22■■■□□ 2.11
TSEN54-209ENST00000583454 BRWD1Q9NSI6 2320 aa28.21■■■□□ 2.11
TSEN54-209ENST00000583454 KRT40Q6A162 431 aa28.21■■■□□ 2.11
TSEN54-209ENST00000583454 PLA2G4DQ86XP0 818 aa28.21■■■□□ 2.11
TSEN54-209ENST00000583454 NFASCO94856 1347 aa28.2■■■□□ 2.11
TSEN54-209ENST00000583454 KIF28PB7ZC32 967 aa28.2■■■□□ 2.1
TSEN54-209ENST00000583454 H3BRB1 525 aa28.2■■■□□ 2.1
TSEN54-209ENST00000583454 TLL1O43897 1013 aa28.2■■■□□ 2.1
TSEN54-209ENST00000583454 MMP1P03956 469 aa28.2■■■□□ 2.1
TSEN54-209ENST00000583454 NONOQ15233 471 aaKnown RBP eCLIP28.2■■■□□ 2.1
TSEN54-209ENST00000583454 ARNTL2Q8WYA1 636 aa28.2■■■□□ 2.1
TSEN54-209ENST00000583454 GPR20Q99678 358 aa28.2■■■□□ 2.1
TSEN54-209ENST00000583454 TUT1Q9H6E5 874 aaKnown RBP28.2■■■□□ 2.1
TSEN54-209ENST00000583454 KAT6AQ92794 2004 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 ABHD14A-ACY1A0A1B0GW23 586 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 LPXNO60711 386 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 KRT2P35908 639 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 MRPS5P82675 430 aaKnown RBP28.19■■■□□ 2.1
TSEN54-209ENST00000583454 TRIM29Q14134 588 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 TNFRSF25Q93038 417 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 LENG9Q96B70 501 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 PKD2L1Q9P0L9 805 aa28.19■■■□□ 2.1
TSEN54-209ENST00000583454 CYP3A7-CYP3A51PA0A087WV96 503 aa28.18■■■□□ 2.1
TSEN54-209ENST00000583454 NOP56O00567 594 aaKnown RBP28.18■■■□□ 2.1
TSEN54-209ENST00000583454 GJB5O95377 273 aa28.18■■■□□ 2.1
TSEN54-209ENST00000583454 SMIM10L2AP0DMW4 78 aa28.18■■■□□ 2.1
TSEN54-209ENST00000583454 SMIM10L2BP0DMW5 78 aa28.18■■■□□ 2.1
TSEN54-209ENST00000583454 CYP3A7P24462 503 aa28.18■■■□□ 2.1
TSEN54-209ENST00000583454 SETQ01105 290 aaPredicted RBP28.18■■■□□ 2.1
TSEN54-209ENST00000583454 ITGB3BPQ13352 177 aaPredicted RBP28.18■■■□□ 2.1
TSEN54-209ENST00000583454 MICALL1Q8N3F8 863 aa28.18■■■□□ 2.1
TSEN54-209ENST00000583454 BRMS1Q9HCU9 246 aa28.18■■■□□ 2.1
TSEN54-209ENST00000583454 CCDC194A0A1B0GVG4 234 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 C17orf102A2RUQ5 167 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 TREHO43280 583 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 NR5A1Q13285 461 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 PRR16Q569H4 304 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 MOXD1Q6UVY6 613 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 TRIM50Q86XT4 487 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 FAM184AQ8NB25 1140 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 C8orf76Q96K31 380 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 MBOAT7Q96N66 472 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 OSBPL7Q9BZF2 842 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 RNPEPQ9H4A4 650 aa28.17■■■□□ 2.1
TSEN54-209ENST00000583454 DHX15O43143 795 aaKnown RBP28.16■■■□□ 2.1
TSEN54-209ENST00000583454 LGR5O75473 907 aa28.16■■■□□ 2.1
TSEN54-209ENST00000583454 FOSBP53539 338 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms