RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 STAM2O75886 525 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 IQCF3P0C7M6 154 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 ARP10275 920 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 HOXD8P13378 290 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-211ENST00000581536 SCG2P13521 617 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 KCNA2P16389 499 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 CLK2P49760 499 aaKnown RBP11.11□□□□□ -0.63
TOP3A-211ENST00000581536 ADCY7P51828 1080 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 PTPN11Q06124 597 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-211ENST00000581536 NEDD9Q14511 834 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 GNPTABQ3T906 1256 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
TOP3A-211ENST00000581536 NLRX1Q86UT6 975 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 SESTD1Q86VW0 696 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 C7orf31Q8N865 590 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 WNT8BQ93098 351 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 GPR20Q99678 358 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 SLC26A6Q9BXS9 759 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 TM6SF1Q9BZW5 370 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 JADE2Q9NQC1 790 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 EVPLQ92817 2033 aa11.11□□□□□ -0.63
TOP3A-211ENST00000581536 CCDC196A0A1B0GTZ2 297 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 H3BRB1 525 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 F2P00734 622 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 LGALS2P05162 132 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 RCAN1P53805 252 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 RASIP1Q5U651 963 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 XRRA1Q6P2D8 792 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 METTL7BQ6UX53 244 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 HERVK_113Q902F9 699 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 SENP7Q9BQF6 1050 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 MXRA8Q9BRK3 442 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-211ENST00000581536 RNPEPQ9H4A4 650 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 TUT1Q9H6E5 874 aaKnown RBP11.1□□□□□ -0.63
TOP3A-211ENST00000581536 MYH9P35579 1960 aaKnown RBP11.1□□□□□ -0.63
TOP3A-211ENST00000581536 CHD7Q9P2D1 2997 aa11.1□□□□□ -0.63
TOP3A-211ENST00000581536 TANC1Q9C0D5 1861 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 NID2Q14112 1375 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-211ENST00000581536 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-211ENST00000581536 NOP56O00567 594 aaKnown RBP11.09□□□□□ -0.63
TOP3A-211ENST00000581536 EDIL3O43854 480 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 IFNAR1P17181 557 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 SMAD3P84022 425 aaKnown RBP11.09□□□□□ -0.63
TOP3A-211ENST00000581536 MTMR1Q13613 665 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 TCTN1Q2MV58 587 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 RPUSD2Q8IZ73 545 aaKnown RBP11.09□□□□□ -0.63
TOP3A-211ENST00000581536 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 RASGRP4Q8TDF6 673 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 GPRASP2Q96D09 838 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-211ENST00000581536 AIFM3Q96NN9 605 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 GUCD1Q96NT3 240 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 ANO3Q9BYT9 981 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 OSBPL7Q9BZF2 842 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 SETD4Q9NVD3 440 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 VPS54Q9P1Q0 977 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
TOP3A-211ENST00000581536 TRIM66O15016 1216 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 TREHO43280 583 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 RNF40O75150 1001 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 FOSP01100 380 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-211ENST00000581536 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 CKBP12277 381 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 CLCN1P35523 988 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 TCF7P36402 384 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-211ENST00000581536 RABGGTBP53611 331 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 AMHR2Q16671 573 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 TRIM71Q2Q1W2 868 aaKnown RBP11.08□□□□□ -0.64
TOP3A-211ENST00000581536 PPP1R18Q6NYC8 613 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 ZMYND12Q9H0C1 365 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 KCNH7Q9NS40 1196 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 TPCN1Q9ULQ1 816 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 A0A0C4DFX4 3053 aa11.08□□□□□ -0.64
TOP3A-211ENST00000581536 FAM86B1E9PN63 330 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 MEIS1O00470 390 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 NBNO60934 754 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 FAM86B2P0C5J1 330 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 MYOGP15173 224 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 MARK3P27448 753 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 ZNF76P36508 570 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 SREBF1P36956 1147 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 ARHGAP4P98171 946 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 SSRP1Q08945 709 aaKnown RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 SCRN1Q12765 414 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 PTK7Q13308 1070 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 ITGB3BPQ13352 177 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 BFSP2Q13515 415 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms