RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 TUT1Q9H6E5 874 aaKnown RBP10.12□□□□□ -0.79
NUP85-217ENST00000581335 BCAS3Q9H6U6 928 aa10.12□□□□□ -0.79
NUP85-217ENST00000581335 COG5Q9UP83 839 aa10.12□□□□□ -0.79
NUP85-217ENST00000581335 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
NUP85-217ENST00000581335 FRMPD4Q14CM0 1322 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 EMSYQ7Z589 1322 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 C17orf102A2RUQ5 167 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 LCHNA4D1U4 455 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 RSPH10B2B2RC85 870 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 SPATA31C2B4DYI2 1134 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 LPXNO60711 386 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 LGR5O75473 907 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 RSPH10BP0C881 870 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 SMARCA1P28370 1054 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 HOXC8P31273 242 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 THPOP40225 353 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 ANTXR2P58335 489 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 NEDD9Q14511 834 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 MBTPS1Q14703 1052 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 SPRED2Q7Z698 418 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 SERINC5Q86VE9 423 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 MB21D2Q8IYB1 491 aaPredicted RBP10.11□□□□□ -0.79
NUP85-217ENST00000581335 SMARCC2Q8TAQ2 1214 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 PIBF1Q8WXW3 757 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 ATP6V0A1Q93050 837 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 INPP4AQ96PE3 977 aaPredicted RBP10.11□□□□□ -0.79
NUP85-217ENST00000581335 USP26Q9BXU7 913 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 RNPEPQ9H4A4 650 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 RTEL1Q9NZ71 1219 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 LMCD1Q9NZU5 365 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 SIP14410 1827 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 MUC3AQ02505 3323 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 MICAL3Q7RTP6 2002 aa10.11□□□□□ -0.79
NUP85-217ENST00000581335 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
NUP85-217ENST00000581335 TREHO43280 583 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 FIBPO43427 364 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 LGALS2P05162 132 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 SMIM10L2AP0DMW4 78 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 SMIM10L2BP0DMW5 78 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 KIF5BP33176 963 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 KCNQ1P51787 676 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 ERVK-21P61565 698 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 SEMA3FQ13275 785 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 CASC1Q6TDU7 716 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 METTL7BQ6UX53 244 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.1□□□□□ -0.79
NUP85-217ENST00000581335 CYFIP1Q7L576 1253 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 ZNF654Q8IZM8 581 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 DBF4BQ8NFT6 615 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 CTCFLQ8NI51 663 aaPredicted RBP10.1□□□□□ -0.79
NUP85-217ENST00000581335 CUL5Q93034 780 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 RRP36Q96EU6 259 aaKnown RBP10.1□□□□□ -0.79
NUP85-217ENST00000581335 TGS1Q96RS0 853 aaKnown RBP10.1□□□□□ -0.79
NUP85-217ENST00000581335 GPR20Q99678 358 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 MTA3Q9BTC8 594 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 SPZ1Q9BXG8 430 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 SUGCTQ9HAC7 445 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 LY9Q9HBG7 655 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 INSL6Q9Y581 213 aa10.1□□□□□ -0.79
NUP85-217ENST00000581335 RBM8AQ9Y5S9 174 aaKnown RBP10.1□□□□□ -0.79
NUP85-217ENST00000581335 LINC01553A4QN01 128 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 PIK3CDO00329 1044 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 MEIS2O14770 477 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 DDAH1O94760 285 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 AMHP03971 560 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 GNAT1P11488 350 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 GNAQP50148 359 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 PLEKHG4Q58EX7 1191 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 PCNX4Q63HM2 1172 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 FAM117BQ6P1L5 589 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 XRRA1Q6P2D8 792 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 USP17L6PQ6QN14 398 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 TMTC2Q8N394 836 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 PBXIP1Q96AQ6 731 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 NECAB3Q96P71 396 aaPredicted RBP10.09□□□□□ -0.79
NUP85-217ENST00000581335 SENP7Q9BQF6 1050 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 MYL10Q9BUA6 226 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 SEC63Q9UGP8 760 aaKnown RBP10.09□□□□□ -0.79
NUP85-217ENST00000581335 VPS9D1Q9Y2B5 631 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 KAT6AQ92794 2004 aa10.09□□□□□ -0.79
NUP85-217ENST00000581335 PRRC2BQ5JSZ5 2229 aaKnown RBP10.09□□□□□ -0.79
NUP85-217ENST00000581335 CCDC69A6NI79 296 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 RBAK-RBAKDNI3L0D1 243 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 PRC1O43663 620 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 CAND2O75155 1236 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 CFHP08603 1231 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 MCM5P33992 734 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 IRX6P78412 446 aaPredicted RBP10.08□□□□□ -0.8
NUP85-217ENST00000581335 VAC14Q08AM6 782 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 UTP14CQ5TAP6 766 aaKnown RBP10.08□□□□□ -0.8
NUP85-217ENST00000581335 NLRX1Q86UT6 975 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 MYOCDQ8IZQ8 938 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 SRBD1Q8N5C6 995 aaKnown RBP10.08□□□□□ -0.8
NUP85-217ENST00000581335 GIMAP8Q8ND71 665 aaPredicted RBP10.08□□□□□ -0.8
NUP85-217ENST00000581335 GDPD5Q8WTR4 605 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 SEPT8Q92599 483 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 TMEM87BQ96K49 555 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 SETD4Q9NVD3 440 aa10.08□□□□□ -0.8
NUP85-217ENST00000581335 MTUS1Q9ULD2 1270 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms