RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 TLE6Q9H808 572 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 ENPP3O14638 875 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 PPFIA3O75145 1194 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 RGS20O76081 388 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 GLP2RO95838 553 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 HOXC8P31273 242 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 HAND2P61296 217 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 SP2Q02086 613 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 ALX1Q15699 326 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 PAN2Q504Q3 1202 aaKnown RBP12.44□□□□□ -0.42
TOP3A-210ENST00000580713 NAALADL2Q58DX5 795 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 FAM26DQ5JW98 314 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 KLHL23Q8NBE8 558 aa12.44□□□□□ -0.42
TOP3A-210ENST00000580713 ZNF689Q96CS4 500 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-210ENST00000580713 MRPL42Q9Y6G3 142 aaKnown RBP12.44□□□□□ -0.42
TOP3A-210ENST00000580713 PER2O15055 1255 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 DGKIO75912 1065 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 FGAP02671 866 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 CHRNA1P02708 482 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 TGFB3P10600 412 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 ATF7P17544 494 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-210ENST00000580713 SP100P23497 879 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-210ENST00000580713 CCND2P30279 289 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 UTP14CQ5TAP6 766 aaKnown RBP12.43□□□□□ -0.42
TOP3A-210ENST00000580713 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
TOP3A-210ENST00000580713 PI4K2BQ8TCG2 481 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 GPKOWQ92917 476 aaPredicted RBP eCLIP12.43□□□□□ -0.42
TOP3A-210ENST00000580713 ZKSCAN3Q9BRR0 538 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 RC3H2Q9HBD1 1191 aaKnown RBP12.43□□□□□ -0.42
TOP3A-210ENST00000580713 ZNF215Q9UL58 517 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-210ENST00000580713 PCDHGC5Q9Y5F6 944 aa12.43□□□□□ -0.42
TOP3A-210ENST00000580713 PLXNA3P51805 1871 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
TOP3A-210ENST00000580713 IBSPP21815 317 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-210ENST00000580713 NBL1P41271 181 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 LPIN1Q14693 890 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 PGM5Q15124 567 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
TOP3A-210ENST00000580713 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 FRMD5Q7Z6J6 570 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 RSPH3Q86UC2 560 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 VSIG10LQ86VR7 867 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 CMTR2Q8IYT2 770 aaKnown RBP12.42□□□□□ -0.42
TOP3A-210ENST00000580713 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 IL31RAQ8NI17 732 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 NKD2Q969F2 451 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-210ENST00000580713 NEK1Q96PY6 1258 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 BCAS3Q9H6U6 928 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 KAT14Q9H8E8 782 aa12.42□□□□□ -0.42
TOP3A-210ENST00000580713 HOXA13P31271 388 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-210ENST00000580713 HSD17B4P51659 736 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 RBM10P98175 930 aaKnown RBP12.41□□□□□ -0.42
TOP3A-210ENST00000580713 SP4Q02446 784 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 ASPRV1Q53RT3 343 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 CYFIP1Q7L576 1253 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 FCHSD1Q86WN1 690 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 KREMEN2Q8NCW0 462 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 SUSD6Q92537 303 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 APOL5Q9BWW9 433 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 EHMT1Q9H9B1 1298 aa12.41□□□□□ -0.42
TOP3A-210ENST00000580713 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 STAG3L1P0CL83 205 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 SRGAP2BP0DMP2 458 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 NEDD9Q14511 834 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 GNPTABQ3T906 1256 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 TAF2Q6P1X5 1199 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 RUFY4Q6ZNE9 571 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 STOX1Q6ZVD7 989 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 DGKHQ86XP1 1220 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 NPAS4Q8IUM7 802 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 TMEM105Q8N8V8 129 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 ESR2Q92731 530 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 JMJD4Q9H9V9 463 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 LRFN2Q9ULH4 789 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
TOP3A-210ENST00000580713 NRCAMQ92823 1304 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 TTC3P53804 2025 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 FSD2A1L4K1 749 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 OPLAHO14841 1288 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 PARP1P09874 1014 aaKnown RBP12.39□□□□□ -0.43
TOP3A-210ENST00000580713 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
TOP3A-210ENST00000580713 SDSP20132 328 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 CD52P31358 61 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 TECP42680 631 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 ADAM17P78536 824 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 MGAT3Q09327 533 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 FBXO47Q5MNV8 452 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 MCTP2Q6DN12 878 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 TSHZ1Q6ZSZ6 1077 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 IQCA1Q86XH1 822 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 DNAJB3Q8WWF6 145 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms