RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 RFC2P35250 354 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 SLC26A2P50443 739 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 STAT5BP51692 787 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 TMEM240Q5SV17 173 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 DIS3L2Q8IYB7 885 aaKnown RBP16.37■□□□□ 0.21
MKS1-207ENST00000578789 RETREG2Q8NC44 543 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 ETNPPLQ8TBG4 499 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 LMBR1Q8WVP7 490 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 ATP6V0A1Q93050 837 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 WNT8BQ93098 351 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 SCLYQ96I15 445 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.37■□□□□ 0.21
MKS1-207ENST00000578789 TCEAL9Q9UHQ7 104 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 MYH9P35579 1960 aaKnown RBP16.37■□□□□ 0.21
MKS1-207ENST00000578789 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 BTBD18B2RXH4 712 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 SOX1O00570 391 aaPredicted RBP16.36■□□□□ 0.21
MKS1-207ENST00000578789 TREHO43280 583 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 SLC37A4O43826 429 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 GAS7O60861 476 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 CKBP12277 381 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 SELPP16109 830 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 MARK3P27448 753 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 FOSBP53539 338 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 PPFIA1Q13136 1202 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 LETM2Q2VYF4 491 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 RASIP1Q5U651 963 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 FAM160B1Q5W0V3 765 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 TRAF7Q6Q0C0 670 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 LRRC8DQ7L1W4 858 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 CCDC60Q8IWA6 550 aaPredicted RBP16.36■□□□□ 0.21
MKS1-207ENST00000578789 C8orf76Q96K31 380 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 RNPC3Q96LT9 517 aaKnown RBP16.36■□□□□ 0.21
MKS1-207ENST00000578789 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 SETD4Q9NVD3 440 aa16.36■□□□□ 0.21
MKS1-207ENST00000578789 DDX25Q9UHL0 483 aaKnown RBP16.36■□□□□ 0.21
MKS1-207ENST00000578789 MBLAC1A4D2B0 266 aaPredicted RBP16.35■□□□□ 0.21
MKS1-207ENST00000578789 WDR64B1ANS9 1081 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 CAND2O75155 1236 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 PSMD10O75832 226 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 PARNO95453 639 aaKnown RBP16.35■□□□□ 0.21
MKS1-207ENST00000578789 ACRP10323 421 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 PLCB4Q15147 1175 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 GRIK4Q16099 956 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 LRCH2Q5VUJ6 765 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 B3GNT9Q6UX72 402 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 ZNF365Q70YC5 407 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 RPUSD2Q8IZ73 545 aaKnown RBP16.35■□□□□ 0.21
MKS1-207ENST00000578789 FAM184AQ8NB25 1140 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 TEKT3Q9BXF9 490 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 KCNMB3Q9NPA1 279 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 ZNF302Q9NR11 478 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 PCDHA10Q9Y5I2 948 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 IGSF9BQ9UPX0 1349 aa16.35■□□□□ 0.21
MKS1-207ENST00000578789 SIP14410 1827 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 BACH1O14867 736 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 TBX3O15119 743 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 PSAPP07602 524 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 SFNP31947 248 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 SAFBQ15424 915 aaKnown RBP eCLIP16.34■□□□□ 0.21
MKS1-207ENST00000578789 FBXO18Q8NFZ0 1043 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 RDM1Q8NG50 284 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 TNPO1Q92973 898 aaKnown RBP16.34■□□□□ 0.21
MKS1-207ENST00000578789 GJA10Q969M2 543 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 UNC45AQ9H3U1 944 aa16.34■□□□□ 0.21
MKS1-207ENST00000578789 MAFBQ9Y5Q3 323 aaPredicted RBP16.34■□□□□ 0.21
MKS1-207ENST00000578789 TET1Q8NFU7 2136 aa16.33■□□□□ 0.21
MKS1-207ENST00000578789 POTEB3A0JP26 581 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 RRN3P2A6NIE6 340 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 CCNT1O60563 726 aaKnown RBP16.33■□□□□ 0.2
MKS1-207ENST00000578789 JAK3P52333 1124 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 GUCY1B3Q02153 619 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 GPNMBQ14956 572 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 MARCH8Q5T0T0 291 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 ZNF618Q5T7W0 954 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 GPR153Q6NV75 609 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 SWSAP1Q6NVH7 229 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 TAF2Q6P1X5 1199 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 POTEBQ6S5H4 581 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 FAM20AQ96MK3 541 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
MKS1-207ENST00000578789 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 TUBE1Q9UJT0 475 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 TRPC6Q9Y210 931 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 COL1A2P08123 1366 aa16.33■□□□□ 0.2
MKS1-207ENST00000578789 HBP1O60381 514 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 FGBP02675 491 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 CXCL10P02778 98 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 INSRRP14616 1297 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 ATP4AP20648 1035 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 THPOP40225 353 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 PDXDC2PQ6P474 469 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 DEFB128Q7Z7B8 93 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 LRCH3Q96II8 777 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms