RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 SH3RF1Q7Z6J0 888 aa15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 TRIM50Q86XT4 487 aa15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 CAGE1Q8TC20 777 aa15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 HAS1Q92839 578 aa15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 TRIM43Q96BQ3 446 aaPredicted RBP15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 RNPEPQ9H4A4 650 aa15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 TRMT13Q9NUP7 481 aaKnown RBP15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 SAMM50Q9Y512 469 aa15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 MAFBQ9Y5Q3 323 aaPredicted RBP15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 TNRC18O15417 2968 aaPredicted RBP15.67■□□□□ 0.1
SNORD3B-1-201ENST00000577988 KIF28PB7ZC32 967 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 DKC1O60832 514 aaKnown RBP eCLIP15.66■□□□□ 0.12e-52■■■■■ 77.2
SNORD3B-1-201ENST00000577988 RPLP2P05387 115 aaKnown RBP15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 HSP90AA1P07900 732 aaKnown RBP15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 RBL2Q08999 1139 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 PTK7Q13308 1070 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 TTC38Q5R3I4 469 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 PDXDC2PQ6P474 469 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 BRAPQ7Z569 592 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 FAM167AQ96KS9 214 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 MTMR9Q96QG7 549 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 GDF15Q99988 308 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 NOC4LQ9BVI4 516 aaKnown RBP15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 UNC45AQ9H3U1 944 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 HIPK3Q9H422 1215 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 PCDHA12Q9UN75 941 aa15.66■□□□□ 0.1
SNORD3B-1-201ENST00000577988 POTEB3A0JP26 581 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 LAD1O00515 517 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 PARNO95453 639 aaKnown RBP15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 ATP2B1P20020 1258 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 MCM7P33993 719 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 ADAM17P78536 824 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 PPFIA1Q13136 1202 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 PLCB4Q15147 1175 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 POTEBQ6S5H4 581 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 CCDC60Q8IWA6 550 aaPredicted RBP15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 TMEM199Q8N511 208 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 RETREG2Q8NC44 543 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 ATP8B4Q8TF62 1192 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 BBXQ8WY36 941 aaPredicted RBP15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 ATP6V0A1Q93050 837 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 UIMC1Q96RL1 719 aa15.65■□□□□ 0.1
SNORD3B-1-201ENST00000577988 DNAH12Q6ZR08 3092 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 COL1A2P08123 1366 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 A0A1W2PPC1 479 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 CAND2O75155 1236 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 SYT1P21579 422 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 MAGEA10P43363 369 aaPredicted RBP15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 EPHA7Q15375 998 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 ZNF174Q15697 407 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 ZNF484Q5JVG2 852 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 TAF2Q6P1X5 1199 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 SERINC5Q86VE9 423 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 TTC12Q9H892 705 aaPredicted RBP15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 NRBP2Q9NSY0 501 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 SETD4Q9NVD3 440 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 GABBR1Q9UBS5 961 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 VAV3Q9UKW4 847 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 CEP131Q9UPN4 1083 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 IGSF9BQ9UPX0 1349 aa15.64■□□□□ 0.09
SNORD3B-1-201ENST00000577988 MBLAC1A4D2B0 266 aaPredicted RBP15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 P4HBP07237 508 aaKnown RBP15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 OR52Z1P0C646 297 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 CYP2C9P11712 490 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 INSRRP14616 1297 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 MARK3P27448 753 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 TOB1P50616 345 aaPredicted RBP15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 PPIGQ13427 754 aaKnown RBP eCLIP15.63■□□□□ 0.092e-7■■■□□ 16.3
SNORD3B-1-201ENST00000577988 GRIK4Q16099 956 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 RPAINQ86UA6 219 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 RPUSD2Q8IZ73 545 aaKnown RBP15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 NEK9Q8TD19 979 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 LMBR1Q8WVP7 490 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 BADQ92934 168 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 GJA10Q969M2 543 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 CTAGE1Q96RT6 745 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 TRPC6Q9Y210 931 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 LTBP2Q14767 1821 aa15.63■□□□□ 0.09
SNORD3B-1-201ENST00000577988 VPS37CA5D8V6 355 aaPredicted RBP15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 WNT7AO00755 349 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 CHMP2AO43633 222 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 BMP15O95972 392 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 PFKMP08237 780 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 ATP4AP20648 1035 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 ITGB8P26012 769 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 RFC2P35250 354 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 TXKP42681 527 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 QARSP47897 775 aaKnown RBP15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 PSMC5P62195 406 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 MDM2Q00987 491 aaPredicted RBP15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 FPGSQ05932 587 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 SPIRE1Q08AE8 756 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 BECN1Q14457 450 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 RSPH3Q86UC2 560 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 PPP1R13LQ8WUF5 828 aa15.62■□□□□ 0.09
SNORD3B-1-201ENST00000577988 PPP1R12CQ9BZL4 782 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms