RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 RASGRP2Q7LDG7 609 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 ZNF444Q8N0Y2 327 aaPredicted RBP8.55□□□□□ -1.04
RAB40B-210ENST00000576148 STK11IPQ8N1F8 1099 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 SLC44A3Q8N4M1 653 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 SSH1Q8WYL5 1049 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 MRPS27Q92552 414 aaKnown RBP8.55□□□□□ -1.04
RAB40B-210ENST00000576148 CHMP4CQ96CF2 233 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 CEP95Q96GE4 821 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 ADAM33Q9BZ11 813 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 FOXQ1Q9C009 403 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 RNPEPQ9H4A4 650 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 EHMT1Q9H9B1 1298 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
RAB40B-210ENST00000576148 LRFN2Q9ULH4 789 aa8.55□□□□□ -1.04
RAB40B-210ENST00000576148 MYH8P13535 1937 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 TM4SF5O14894 197 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 CLASP2O75122 1294 aaKnown RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 LRRN2O75325 713 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 MBD4O95243 580 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 GNAI3P08754 354 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 HOXC8P31273 242 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 GATMP50440 423 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 RARSP54136 660 aaKnown RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 PLCB3Q01970 1234 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 KRT17Q04695 432 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 RCSD1Q6JBY9 416 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 KANK3Q6NY19 840 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 KCTD1Q719H9 257 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 CELF5Q8N6W0 485 aaKnown RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 NELL1Q92832 810 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 TMEM121BQ9BXQ6 578 aaPredicted RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 FTHL17Q9BXU8 183 aa8.54□□□□□ -1.04
RAB40B-210ENST00000576148 FAM126AQ9BYI3 521 aaPredicted RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 CCDC8Q9H0W5 538 aaPredicted RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
RAB40B-210ENST00000576148 TCRBV5S4A2TA0A5A2 114 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 H3BRB1 525 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 KCNK5O95279 499 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 SCG2P13521 617 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 LIMK1P53667 647 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 SMC1AQ14683 1233 aaKnown RBP8.53□□□□□ -1.04
RAB40B-210ENST00000576148 PTPN14Q15678 1187 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 STXBP2Q15833 593 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 TMC5Q6UXY8 1006 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 PDZD3Q86UT5 571 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 MRPL43Q8N983 215 aaKnown RBP8.53□□□□□ -1.04
RAB40B-210ENST00000576148 COLGALT1Q8NBJ5 622 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 TMEM87AQ8NBN3 555 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 ADAM32Q8TC27 787 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 RSAD2Q8WXG1 361 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 CLEC4DQ8WXI8 215 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 MAP4K1Q92918 833 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 NXPE3Q969Y0 559 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 SPATA33Q96N06 139 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 C16orf70Q9BSU1 422 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 MYL10Q9BUA6 226 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 RANBP17Q9H2T7 1088 aaKnown RBP8.53□□□□□ -1.04
RAB40B-210ENST00000576148 TUT1Q9H6E5 874 aaKnown RBP8.53□□□□□ -1.04
RAB40B-210ENST00000576148 SETD4Q9NVD3 440 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
RAB40B-210ENST00000576148 PNMA2Q9UL42 364 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 MRVI1Q9Y6F6 885 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 SLC4A4Q9Y6R1 1079 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 TTC3P53804 2025 aa8.53□□□□□ -1.04
RAB40B-210ENST00000576148 PNMA6EA0A0J9YXQ4 647 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 SPDYE4A6NLX3 237 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 LAG3P18627 525 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 CA8P35219 290 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 MAGEA9P43362 315 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 STARD6P59095 220 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 FOXC1Q12948 553 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
RAB40B-210ENST00000576148 AASDHQ4L235 1098 aaPredicted RBP8.52□□□□□ -1.05
RAB40B-210ENST00000576148 TSSK4Q6SA08 328 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 TSHZ1Q6ZSZ6 1077 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 GPR149Q86SP6 731 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 RSPH3Q86UC2 560 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 RTN4RL1Q86UN2 441 aaPredicted RBP8.52□□□□□ -1.05
RAB40B-210ENST00000576148 CABP7Q86V35 215 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 LINC01599Q8WXQ3 324 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 GATA6Q92908 595 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 ZNF287Q9HBT7 754 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 RXFP3Q9NSD7 469 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 TYW1Q9NV66 732 aaKnown RBP8.52□□□□□ -1.05
RAB40B-210ENST00000576148 PCDHB7Q9Y5E2 793 aa8.52□□□□□ -1.05
RAB40B-210ENST00000576148 ITPR1Q14643 2758 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 LCTP09848 1927 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 KANSL1LA0AUZ9 987 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 C2orf71A6NGG8 1288 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 TBKBP1A7MCY6 615 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 SPINK2P20155 84 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 IBSPP21815 317 aaPredicted RBP8.51□□□□□ -1.05
RAB40B-210ENST00000576148 GBP2P32456 591 aaPredicted RBP8.51□□□□□ -1.05
RAB40B-210ENST00000576148 NRLP54845 237 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 ARHGAP4P98171 946 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 LETM2Q2VYF4 491 aa8.51□□□□□ -1.05
RAB40B-210ENST00000576148 HSDL1Q3SXM5 330 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms