RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 ARHGEF15O94989 841 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 GGPS1O95749 300 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 PFKMP08237 780 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 FAM86B2P0C5J1 330 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 ARP10275 920 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 PDIA4P13667 645 aaKnown RBP18.84■□□□□ 0.61
TMEM88-202ENST00000574668 GCFC2P16383 781 aaKnown RBP18.84■□□□□ 0.61
TMEM88-202ENST00000574668 COL9A1P20849 921 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 UBA1P22314 1058 aaKnown RBP18.84■□□□□ 0.61
TMEM88-202ENST00000574668 U2AF2P26368 475 aaKnown RBP eCLIP18.84■□□□□ 0.61
TMEM88-202ENST00000574668 TFF2Q03403 129 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 SEMA3FQ13275 785 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 GIMAP8Q8ND71 665 aaPredicted RBP18.84■□□□□ 0.61
TMEM88-202ENST00000574668 MLXIPQ9HAP2 919 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 KCNH7Q9NS40 1196 aa18.84■□□□□ 0.61
TMEM88-202ENST00000574668 MYH7BA7E2Y1 1941 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 MARCH6O60337 910 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 SORBS3O60504 671 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 TDP2O95551 362 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 IQCF3P0C7M6 154 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 BRDTQ58F21 947 aaPredicted RBP18.83■□□□□ 0.6
TMEM88-202ENST00000574668 NFRKBQ6P4R8 1299 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 SENP7Q9BQF6 1050 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 SDF4Q9BRK5 362 aa18.83■□□□□ 0.6
TMEM88-202ENST00000574668 DDX25Q9UHL0 483 aaKnown RBP18.83■□□□□ 0.6
TMEM88-202ENST00000574668 IGLV3-22A0A075B6J6 115 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 CYP3A7-CYP3A51PA0A087WV96 503 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 EDIL3O43854 480 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 CYP3A7P24462 503 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 Q4G0T1 1027 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 CELF3Q5SZQ8 465 aaKnown RBP18.82■□□□□ 0.6
TMEM88-202ENST00000574668 PPP4R3AQ6IN85 833 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 RETREG2Q8NC44 543 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 ZNF577Q9BSK1 485 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 FTOQ9C0B1 505 aaKnown RBP eCLIP18.82■□□□□ 0.6
TMEM88-202ENST00000574668 AGO4Q9HCK5 861 aaKnown RBP18.82■□□□□ 0.6
TMEM88-202ENST00000574668 TCEAL9Q9UHQ7 104 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 MTMR6Q9Y217 621 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 KIAA1217Q5T5P2 1943 aa18.82■□□□□ 0.6
TMEM88-202ENST00000574668 SCN10AQ9Y5Y9 1956 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 MYO9BQ13459 2157 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 ACTN1P12814 892 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 KCNA2P16389 499 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 RFC2P35250 354 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 TRAPPC10P48553 1259 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 KCNQ1P51787 676 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 SP2Q02086 613 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 ARHGAP1Q07960 439 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 SKIV2LQ15477 1246 aaKnown RBP18.81■□□□□ 0.6
TMEM88-202ENST00000574668 TTC38Q5R3I4 469 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 CYFIP1Q7L576 1253 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 BRAPQ7Z569 592 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 SPRED2Q7Z698 418 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 FERMT3Q86UX7 667 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 AFG1LQ8WV93 481 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 SPATA33Q96N06 139 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 MBOAT7Q96N66 472 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 UIMC1Q96RL1 719 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 NOD1Q9Y239 953 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 MTCH2Q9Y6C9 303 aa18.81■□□□□ 0.6
TMEM88-202ENST00000574668 NOP56O00567 594 aaKnown RBP18.8■□□□□ 0.6
TMEM88-202ENST00000574668 KPNA6O60684 536 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 ATP9AO75110 1047 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 BAG4O95429 457 aaKnown RBP18.8■□□□□ 0.6
TMEM88-202ENST00000574668 SP4Q02446 784 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 MYSM1Q5VVJ2 828 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 METTL7BQ6UX53 244 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 ARNTL2Q8WYA1 636 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 CTAGE1Q96RT6 745 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
TMEM88-202ENST00000574668 TSPYL2Q9H2G4 693 aaPredicted RBP18.8■□□□□ 0.6
TMEM88-202ENST00000574668 NFASCO94856 1347 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 IPO5O00410 1097 aaKnown RBP18.79■□□□□ 0.6
TMEM88-202ENST00000574668 MSH4O15457 936 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 BMP1P13497 986 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 MCM7P33993 719 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 TAP1Q03518 808 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 PTPN11Q06124 597 aaPredicted RBP18.79■□□□□ 0.6
TMEM88-202ENST00000574668 BFSP2Q13515 415 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 ZNF174Q15697 407 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 PTGISQ16647 500 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 RILPL1Q5EBL4 403 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 TMCO2Q7Z6W1 182 aaPredicted RBP18.79■□□□□ 0.6
TMEM88-202ENST00000574668 HERC6Q8IVU3 1022 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 EMID1Q96A84 441 aaPredicted RBP18.79■□□□□ 0.6
TMEM88-202ENST00000574668 LENG9Q96B70 501 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 TBC1D22BQ9NU19 505 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 SLC9A2Q9UBY0 812 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 TANC1Q9C0D5 1861 aa18.79■□□□□ 0.6
TMEM88-202ENST00000574668 DDX39AO00148 427 aaKnown RBP18.78■□□□□ 0.6
TMEM88-202ENST00000574668 SLC37A4O43826 429 aa18.78■□□□□ 0.6
TMEM88-202ENST00000574668 NEMFO60524 1076 aa18.78■□□□□ 0.6
TMEM88-202ENST00000574668 MMP3P08254 477 aa18.78■□□□□ 0.6
TMEM88-202ENST00000574668 ORC2Q13416 577 aaPredicted RBP18.78■□□□□ 0.6
TMEM88-202ENST00000574668 GPNMBQ14956 572 aa18.78■□□□□ 0.6
TMEM88-202ENST00000574668 FOXD4L5Q5VV16 416 aaPredicted RBP18.78■□□□□ 0.6
TMEM88-202ENST00000574668 GDF6Q6KF10 455 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms