RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 RAG1P15918 1043 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 PPP2R5CQ13362 524 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 ZNF174Q15697 407 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 TMEM266Q2M3C6 531 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 PDXDC2PQ6P474 469 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 CKAP2LQ8IYA6 745 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 ATP6V0A1Q93050 837 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 TRMT13Q9NUP7 481 aaKnown RBP14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 ZMYND8Q9ULU4 1186 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 TRPC6Q9Y210 931 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 TELO2Q9Y4R8 837 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 POTEB3A0JP26 581 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 H0YGN5 161 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 KIAA0355O15063 1070 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 OR52Z1P0C646 297 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 SYN1P17600 705 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 MARK3P27448 753 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 TXKP42681 527 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 PPFIA1Q13136 1202 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 BFSP2Q13515 415 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 PRPF38BQ5VTL8 546 aaKnown RBP14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 POTEBQ6S5H4 581 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 CCDC60Q8IWA6 550 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 HAS1Q92839 578 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 GJA10Q969M2 543 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 FAM167AQ96KS9 214 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 PCYT2Q99447 389 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 RAB34Q9BZG1 259 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 TRPV6Q9H1D0 765 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 RNPEPQ9H4A4 650 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 ZSCAN16Q9H4T2 348 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 TTC12Q9H892 705 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 GABBR1Q9UBS5 961 aa14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 MAFBQ9Y5Q3 323 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC1-206ENST00000573989 HBP1O60381 514 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 BMP15O95972 392 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 PLCB4Q15147 1175 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 GDF6Q6KF10 455 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 B3GNT9Q6UX72 402 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 CAGE1Q8TC20 777 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 ATP8B4Q8TF62 1192 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 BBXQ8WY36 941 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 HIPK3Q9H422 1215 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 TBX21Q9UL17 535 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
TRAPPC1-206ENST00000573989 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 TIMP1P01033 207 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 RPLP2P05387 115 aaKnown RBP14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 PTK7Q13308 1070 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 EPHA7Q15375 998 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 GRIK4Q16099 956 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 NCAPH2Q6IBW4 605 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 FERMT3Q86UX7 667 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 TMEM199Q8N511 208 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 RETREG2Q8NC44 543 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 SPRYD3Q8NCJ5 442 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 PPP1R13LQ8WUF5 828 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 TRIM43Q96BQ3 446 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 MTMR9Q96QG7 549 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 SETD4Q9NVD3 440 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 VAV3Q9UKW4 847 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 PCDHB6Q9Y5E3 794 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 IGSF9BQ9UPX0 1349 aa14.35□□□□□ -0.11
TRAPPC1-206ENST00000573989 COL1A2P08123 1366 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 LTBP2Q14767 1821 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 WNT7AO00755 349 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 P4HBP07237 508 aaKnown RBP14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 CYP2C9P11712 490 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 INSRRP14616 1297 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 HOXC8P31273 242 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 TOB1P50616 345 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 PSMC5P62195 406 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 PTGDRQ13258 359 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 ZNF484Q5JVG2 852 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 RSPH3Q86UC2 560 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 ERMNQ8TAM6 284 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 LMBR1Q8WVP7 490 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 PPP1R12CQ9BZL4 782 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 TMEM60Q9H2L4 133 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 STK24Q9Y6E0 443 aa14.34□□□□□ -0.11
TRAPPC1-206ENST00000573989 PARNO95453 639 aaKnown RBP14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 OATP04181 439 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 PRPHP41219 470 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 TECP42680 631 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 QARSP47897 775 aaKnown RBP14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 IGBP1P78318 339 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 PRKCEQ02156 737 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 NBR1Q14596 966 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 XKR3Q5GH77 459 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 MFSD5Q6N075 450 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms