RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 USP49Q70CQ1 688 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 CNGA4Q8IV77 575 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 CCDC112Q8NEF3 446 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 P2RX5Q93086 422 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 DHTKD1Q96HY7 919 aaPredicted RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 FAM207AQ9NSI2 230 aaPredicted RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 SLC37A4O43826 429 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 STX10O60499 249 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 KIF4AO95239 1232 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 PSMC4P43686 418 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 CNTN2Q02246 1040 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 LRMPQ12912 555 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 PSMD2Q13200 908 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 SFR1Q86XK3 245 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMG6-213ENST00000573166 RPS6KC1Q96S38 1066 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 SMARCAD1Q9H4L7 1026 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 A1CFQ9NQ94 594 aaKnown RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 MSH4O15457 936 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 STAM2O75886 525 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 ERCC5P28715 1186 aaPredicted RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 TNFAIP2Q03169 654 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 MUM1L1Q5H9M0 696 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 SLC30A10Q6XR72 485 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 UNC13DQ70J99 1090 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 GPIHBP1Q8IV16 184 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 ABI1Q8IZP0 508 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 C16orf45Q96MC5 204 aaPredicted RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 CRACR2AQ9BSW2 395 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 TMCO5BA8MYB1 307 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 ADORA2AP29274 412 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 YWHABP31946 246 aaKnown RBP11.1□□□□□ -0.63
SMG6-213ENST00000573166 HIRAP54198 1017 aaPredicted RBP11.1□□□□□ -0.63
SMG6-213ENST00000573166 OSTNP61366 133 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 ST3GAL1Q11201 340 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 TAF12Q16514 161 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 TTC16Q8NEE8 873 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 MTRQ99707 1265 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 TUFT1Q9NNX1 390 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 PXMP2Q9NR77 195 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 GDAQ9Y2T3 454 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 ROBO3Q96MS0 1386 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
SMG6-213ENST00000573166 AKR1B15C9JRZ8 316 aaPredicted RBP11.1□□□□□ -0.63
SMG6-213ENST00000573166 TNNC2P02585 160 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 CD19P15391 556 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 TREML2Q5T2D2 321 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 CYP4F22Q6NT55 531 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 ZBTB33Q86T24 672 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 RANBP17Q9H2T7 1088 aaKnown RBP11.1□□□□□ -0.63
SMG6-213ENST00000573166 TMX1Q9H3N1 280 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 NLRC4Q9NPP4 1024 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 FAM184BQ9ULE4 1060 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 EYA4O95677 639 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 ARP10275 920 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 MAPK6Q16659 721 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 FMNL3Q8IVF7 1028 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 SMAP1Q8IYB5 467 aaPredicted RBP11.1□□□□□ -0.63
SMG6-213ENST00000573166 FAM193BQ96PV7 902 aaPredicted RBP11.1□□□□□ -0.63
SMG6-213ENST00000573166 PRM3Q9NNZ6 103 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 THSD7AQ9UPZ6 1657 aa11.1□□□□□ -0.63
SMG6-213ENST00000573166 SLC16A4O15374 487 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 ABCD1P33897 745 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 KRT9P35527 623 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 KIFAP3Q92845 792 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 CCNE1P24864 410 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 NOLC1Q14978 699 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMG6-213ENST00000573166 ARHGAP44Q17R89 818 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 FAM186BQ8IYM0 893 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 DNERQ8NFT8 737 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
SMG6-213ENST00000573166 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
SMG6-213ENST00000573166 PVALEFA0A1B0GWK0 134 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 BCRP11274 1271 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 PHKA2P46019 1235 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 ACTR2P61160 394 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 ALCAMQ13740 583 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 RIOX2Q8IUF8 465 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 CNOT6LQ96LI5 555 aaKnown RBP11.08□□□□□ -0.64
SMG6-213ENST00000573166 ALS2CR12Q96Q35 445 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 SNCAIPQ9Y6H5 919 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 NEBLO76041 1014 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 PSMC2P35998 433 aaKnown RBP11.08□□□□□ -0.64
SMG6-213ENST00000573166 ZNF75DP51815 510 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 PRKCEQ02156 737 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 TMEM132BQ14DG7 1078 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms