RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
RPAIN-212ENST00000573126 FRMD3A2A2Y4 597 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 GOLGA6BA6NDN3 693 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 NDUFB10O96000 172 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 MYBP10242 640 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 SLC9A1P19634 815 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 HOXA7P31268 230 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-212ENST00000573126 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
RPAIN-212ENST00000573126 AP3B2Q13367 1082 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 DCAF17Q5H9S7 520 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-212ENST00000573126 FOXR1Q6PIV2 292 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-212ENST00000573126 GOLGA6L1Q8N7Z2 621 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 MKL1Q969V6 931 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 C10orf71Q711Q0 1435 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 HOXD13P35453 343 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 ITIH3Q06033 890 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 C8orf74Q6P047 294 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 FBXO11Q86XK2 927 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 RNF10Q8N5U6 811 aaKnown RBP12.34□□□□□ -0.43
RPAIN-212ENST00000573126 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 SYN2Q92777 582 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-212ENST00000573126 GANQ9H2C0 597 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 STIM2Q9P246 746 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 TRPC5Q9UL62 973 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-212ENST00000573126 PITPNM2Q9BZ72 1349 aa12.34□□□□□ -0.43
RPAIN-212ENST00000573126 RPA1P27694 616 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ALDH1B1P30837 517 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 JAG1P78504 1218 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 KCNA1Q09470 495 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 PTPROQ16827 1216 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 TCERG1LQ5VWI1 586 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 PODNQ7Z5L7 613 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ERMNQ8TAM6 284 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ARMCX3Q9UH62 379 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ESYT3A0FGR9 886 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ZSCAN5CA6NGD5 496 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-212ENST00000573126 SFI1A8K8P3 1242 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 AKAP3O75969 853 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 MMP10P09238 476 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 PTK2Q05397 1052 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 NAB2Q15742 525 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ASIC2Q16515 512 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 KNOP1Q1ED39 458 aaKnown RBP12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ABCB5Q2M3G0 1257 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 CFAP221Q4G0U5 840 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 MSL1Q68DK7 614 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 ARHGAP27Q6ZUM4 889 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 SPAG5Q96R06 1193 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 GOLPH3Q9H4A6 298 aa12.33□□□□□ -0.44
RPAIN-212ENST00000573126 OPLAHO14841 1288 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 MSH4O15457 936 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 GH2P01242 217 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 MOXD1Q6UVY6 613 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 TMEM179Q6ZVK1 233 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-212ENST00000573126 SYT2Q8N9I0 419 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-212ENST00000573126 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 IKZF4Q9H2S9 585 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 TDRD3Q9H7E2 651 aaKnown RBP12.32□□□□□ -0.44
RPAIN-212ENST00000573126 LUC7LQ9NQ29 371 aaKnown RBP12.32□□□□□ -0.44
RPAIN-212ENST00000573126 AIPL1Q9NZN9 384 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 EML1O00423 815 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 CLIC2O15247 247 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 XRCC5P13010 732 aaKnown RBP12.32□□□□□ -0.44
RPAIN-212ENST00000573126 UCHL3P15374 230 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 SREBF1P36956 1147 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 CASP4P49662 377 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 TATDN1Q6P1N9 297 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
RPAIN-212ENST00000573126 NLGN1Q8N2Q7 840 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 PIGOQ8TEQ8 1089 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 LCMT1Q9UIC8 334 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 TRAF3IP3Q9Y228 551 aa12.32□□□□□ -0.44
RPAIN-212ENST00000573126 ECE2O60344 883 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 GCNT3O95395 438 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 GLI1P08151 1106 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 POLD1P28340 1107 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 ZNF76P36508 570 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 EXOC3L4Q17RC7 722 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 Q4G0T1 1027 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 ZNF571Q7Z3V5 609 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 MASTLQ96GX5 879 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 IDI2Q9BXS1 227 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 CWC15Q9P013 229 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 GRID2IPA4D2P6 1211 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms