RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 PRKAG3Q9UGI9 489 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 SLC12A7Q9Y666 1083 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 TTC3P53804 2025 aa17.26■□□□□ 0.35
COMMD4-223ENST00000568301 SLC27A2O14975 620 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 RB1P06400 928 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 CTNNB1P35222 781 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 NECTIN1Q15223 517 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 CLUL1Q15846 466 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 GRIK4Q16099 956 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 RUFY4Q6ZNE9 571 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 ADHFE1Q8IWW8 467 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 FIBCD1Q8N539 461 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 GLG1Q92896 1179 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 JADE2Q9NQC1 790 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 TUBE1Q9UJT0 475 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 FAM50BQ9Y247 325 aa17.25■□□□□ 0.35
COMMD4-223ENST00000568301 C5orf67F2Z3F1 127 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 ENPP3O14638 875 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 GRM6O15303 877 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 GHRP10912 638 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 RXRAP19793 462 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 IRS1P35568 1242 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 BMPR1AP36894 532 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 MRE11P49959 708 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 NHLH1Q02575 133 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-223ENST00000568301 MGAT3Q09327 533 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 LPIN1Q14693 890 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 CTC1Q2NKJ3 1217 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 MARCH8Q5T0T0 291 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 SGMS1Q86VZ5 419 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
COMMD4-223ENST00000568301 FBXL18Q96ME1 805 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 PCDHA6Q9UN73 950 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 RWDD3Q9Y3V2 267 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 PCDHA8Q9Y5H6 950 aa17.24■□□□□ 0.35
COMMD4-223ENST00000568301 RRN3P2A6NIE6 340 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 NCK2O43639 380 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 MARK3P27448 753 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 HYAL1Q12794 435 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-223ENST00000568301 UBE2SQ16763 222 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 FBXO47Q5MNV8 452 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 CREB3L3Q68CJ9 461 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 TMTC3Q6ZXV5 915 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 CCDC82Q8N4S0 544 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 DNAJB3Q8WWF6 145 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 SQORQ9Y6N5 450 aa17.23■□□□□ 0.35
COMMD4-223ENST00000568301 hCG_1642624A0A1W2PR95 340 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 CSPG5O95196 566 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 GTF2F1P35269 517 aaKnown RBP eCLIP17.22■□□□□ 0.354e-9■■■■■ 28.7
COMMD4-223ENST00000568301 SMAD2Q15796 467 aaKnown RBP17.22■□□□□ 0.35
COMMD4-223ENST00000568301 IER5Q5VY09 327 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 SYNE3Q6ZMZ3 975 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 HFE2Q6ZVN8 426 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 CLP1Q92989 425 aaKnown RBP17.22■□□□□ 0.35
COMMD4-223ENST00000568301 C11orf84Q9BUA3 381 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-223ENST00000568301 UPF3BQ9BZI7 483 aaKnown RBP17.22■□□□□ 0.35
COMMD4-223ENST00000568301 LMAN2LQ9H0V9 348 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 JPH1Q9HDC5 661 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-223ENST00000568301 KCNH7Q9NS40 1196 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 CDY2AQ9Y6F7 541 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 ZNF318Q5VUA4 2279 aa17.22■□□□□ 0.35
COMMD4-223ENST00000568301 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 MBTPS2O43462 519 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 INSRRP14616 1297 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 MRPS6P82932 125 aaKnown RBP17.21■□□□□ 0.35
COMMD4-223ENST00000568301 TSHZ1Q6ZSZ6 1077 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 ZNF689Q96CS4 500 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-223ENST00000568301 PCYT2Q99447 389 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 MXRA8Q9BRK3 442 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 KCNH6Q9H252 994 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 IGFLR1Q9H665 355 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
COMMD4-223ENST00000568301 PKD2L1Q9P0L9 805 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 SLC9A2Q9UBY0 812 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 MUTYHQ9UIF7 546 aa17.21■□□□□ 0.35
COMMD4-223ENST00000568301 ADGRA3Q8IWK6 1321 aa17.21■□□□□ 0.34
COMMD4-223ENST00000568301 LINC01565O15544 149 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 DGKIO75912 1065 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 FOSP01100 380 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-223ENST00000568301 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-223ENST00000568301 PLPPR4Q7Z2D5 763 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 RAB11FIP4Q86YS3 637 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 PLVAPQ9BX97 442 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 FTHL17Q9BXU8 183 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 AGO3Q9H9G7 860 aaKnown RBP17.2■□□□□ 0.34
COMMD4-223ENST00000568301 RIC8AQ9NPQ8 531 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
COMMD4-223ENST00000568301 NFASCO94856 1347 aa17.2■□□□□ 0.34
COMMD4-223ENST00000568301 TBX10O75333 385 aa17.19■□□□□ 0.34
COMMD4-223ENST00000568301 IGBP1P78318 339 aa17.19■□□□□ 0.34
COMMD4-223ENST00000568301 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms