RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 CCDC13Q8IYE1 715 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 RNF10Q8N5U6 811 aaKnown RBP6.73□□□□□ -1.33
CDH13-209ENST00000567109 TMCO5AQ8N6Q1 288 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 JPH2Q9BR39 696 aaPredicted RBP6.73□□□□□ -1.33
CDH13-209ENST00000567109 PSTPIP2Q9H939 334 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 PCDHA12Q9UN75 941 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 USP17L3A6NCW0 530 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 USP17L4A6NCW7 530 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 SGK1O00141 431 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 C21orf2O43822 256 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 N4BP1O75113 896 aaKnown RBP6.73□□□□□ -1.33
CDH13-209ENST00000567109 FOXO4P98177 505 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 PPARAQ07869 468 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 MYO1EQ12965 1108 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 CREB3L3Q68CJ9 461 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 USP17L1Q7RTZ2 530 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 UBR1Q8IWV7 1749 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 FAM178BQ8IXR5 827 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 TRIM58Q8NG06 486 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 GRK7Q8WTQ7 553 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 ZNF532Q9HCE3 1301 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 PCDHA1Q9Y5I3 950 aa6.73□□□□□ -1.33
CDH13-209ENST00000567109 LTBP4Q8N2S1 1624 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 INO80B-WBP1J3KQ70 363 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 UBXN8O00124 270 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 TROVE2P10155 538 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDH13-209ENST00000567109 ARHGDIAP52565 204 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 HDLBPQ00341 1268 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 RUFY3Q7L099 469 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 RAET1EQ8TD07 263 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 INO80BQ9C086 356 aaPredicted RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 DNAJC25Q9H1X3 360 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 ZNF212Q9UDV6 495 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 KIF28PB7ZC32 967 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 DNM1Q05193 864 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 SFMBT2Q5VUG0 894 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 FAM180AQ6UWF9 173 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 FBXO11Q86XK2 927 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 C3orf20Q8ND61 904 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 RMDN2Q96LZ7 410 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 RABEP2Q9H5N1 569 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 TYW1Q9NV66 732 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 RNF181Q9P0P0 153 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 H3BRJ5 948 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 NPM3O75607 178 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 TMCC1O94876 653 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 TRIM59Q8IWR1 403 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 AFG1LQ8WV93 481 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 GPAA1O43292 621 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 ECE2O60344 883 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 APOEP02649 317 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 USP17L8P0C7I0 530 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 BPIFB4P59827 614 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 DEUP1Q05D60 604 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 THOC5Q13769 683 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 ABCB5Q2M3G0 1257 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 HHIPL2Q6UWX4 724 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 GPBP1Q86WP2 473 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 MSL3Q8N5Y2 521 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 C7orf31Q8N865 590 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 DNAAF3Q8N9W5 541 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 SLC4A9Q96Q91 983 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 AMFRQ9UKV5 643 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 KRT87PA6NCN2 255 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 STAT1P42224 750 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 TTC38Q5R3I4 469 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 PHLDB3Q6NSJ2 640 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 MCUQ8NE86 351 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 HOMER3Q9NSC5 361 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 PANK4Q9NVE7 773 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 DONSONQ9NYP3 566 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 ANGEL1Q9UNK9 670 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 SRGNP10124 158 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 ACCSLQ4AC99 568 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 GLE1Q53GS7 698 aaKnown RBP6.72□□□□□ -1.33
CDH13-209ENST00000567109 KLC3Q6P597 504 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 EMBQ6PCB8 327 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 SKAP1Q86WV1 359 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 VSIG1Q86XK7 387 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 FBXO18Q8NFZ0 1043 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 CCDC138Q96M89 665 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 BPIFA3Q9BQP9 254 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 HYOU1Q9Y4L1 999 aa6.72□□□□□ -1.33
CDH13-209ENST00000567109 MYH13Q9UKX3 1938 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 NELFCDQ8IXH7 590 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 LRRC47Q8N1G4 583 aaKnown RBP6.71□□□□□ -1.33
CDH13-209ENST00000567109 RAB42Q8N4Z0 105 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 OTUD7AQ8TE49 926 aaPredicted RBP6.71□□□□□ -1.33
CDH13-209ENST00000567109 TEKT4Q8WW24 435 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 MED23Q9ULK4 1368 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 CCDC88CQ9P219 2028 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 ZNF263O14978 683 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 CUTAO60888 179 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 OPHN1O60890 802 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 ATP5HO75947 161 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 VCPP55072 806 aaKnown RBP6.71□□□□□ -1.33
CDH13-209ENST00000567109 RASGRF1Q13972 1273 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 DSTYKQ6XUX3 929 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 UPF1Q92900 1129 aaKnown RBP eCLIP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms