RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 PRDM5Q9NQX1 630 aaPredicted RBP12.38□□□□□ -0.43
CDH11-212ENST00000566827 TRMT13Q9NUP7 481 aaKnown RBP12.38□□□□□ -0.43
CDH11-212ENST00000566827 KCNG1Q9UIX4 513 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 GJA9P57773 515 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 MTMR1Q13613 665 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 PCNX4Q63HM2 1172 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 KRT40Q6A162 431 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 CHAMP1Q96JM3 812 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 IGLV3-22A0A075B6J6 115 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 KBTBD13C9JR72 458 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
CDH11-212ENST00000566827 TLE2Q04725 743 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 TTLL4Q14679 1199 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 QPCTQ16769 361 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 C4orf46Q504U0 113 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 RNF180Q86T96 592 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 MSL3Q8N5Y2 521 aaKnown RBP12.37□□□□□ -0.43
CDH11-212ENST00000566827 LENG9Q96B70 501 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 SPATA33Q96N06 139 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 FRMPD4Q14CM0 1322 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 A0A087WWV3 80 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 ST18O60284 1047 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 KCNA2P16389 499 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 PURAQ00577 322 aaKnown RBP12.37□□□□□ -0.43
CDH11-212ENST00000566827 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 IQSEC1Q6DN90 963 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 KAT2BQ92831 832 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 IWS1Q96ST2 819 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 PCDH12Q9NPG4 1184 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 STARD7Q9NQZ5 370 aa12.37□□□□□ -0.43
CDH11-212ENST00000566827 TMEM150BA6NC51 233 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 CHMP2AO43633 222 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 EVI5O60447 810 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 CCNE2O96020 404 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 MMP3P08254 477 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 CYP2C9P11712 490 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 GJB2P29033 226 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 SREBF1P36956 1147 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 FAM47CQ5HY64 1035 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
CDH11-212ENST00000566827 SLC39A5Q6ZMH5 540 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 DIS3L2Q8IYB7 885 aaKnown RBP12.36□□□□□ -0.43
CDH11-212ENST00000566827 OSBPL7Q9BZF2 842 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 MSCO60682 206 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 ZNF76P36508 570 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 RTP1P59025 263 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 PKP1Q13835 747 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 CPLX2Q6PUV4 134 aaKnown RBP12.36□□□□□ -0.43
CDH11-212ENST00000566827 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 WNT8BQ93098 351 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 MLXIPQ9HAP2 919 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 CAPN10Q9HC96 672 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 UBIAD1Q9Y5Z9 338 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 SCN5AQ14524 2016 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
CDH11-212ENST00000566827 TRIM43BA6NCK2 446 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 MRPL58Q14197 206 aaKnown RBP12.35□□□□□ -0.43
CDH11-212ENST00000566827 CEP55Q53EZ4 464 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 CELF3Q5SZQ8 465 aaKnown RBP12.35□□□□□ -0.43
CDH11-212ENST00000566827 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
CDH11-212ENST00000566827 ARRDC4Q8NCT1 418 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 DDX12PQ92771 950 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 TRIM43Q96BQ3 446 aaPredicted RBP12.35□□□□□ -0.43
CDH11-212ENST00000566827 B4GALT4O60513 344 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 TRAPPC12Q8WVT3 735 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 TNFRSF25Q93038 417 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 CTAGE1Q96RT6 745 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH11-212ENST00000566827 RNPEPQ9H4A4 650 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 WDR81Q562E7 1941 aa12.35□□□□□ -0.43
CDH11-212ENST00000566827 MMP1P03956 469 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 PLA2G4DQ86XP0 818 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 FMNL3Q8IVF7 1028 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 GLT1D1Q96MS3 346 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
CDH11-212ENST00000566827 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
CDH11-212ENST00000566827 EVPLQ92817 2033 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 ESYT2A0FGR8 921 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 HMGB1P1B2RPK0 211 aaPredicted RBP12.34□□□□□ -0.43
CDH11-212ENST00000566827 MEIS1O00470 390 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 CDKL5O76039 1030 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 GH1P01241 217 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 GNA11P29992 359 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 DNAJA1P31689 397 aaKnown RBP12.34□□□□□ -0.43
CDH11-212ENST00000566827 TCF7P36402 384 aaPredicted RBP12.34□□□□□ -0.43
CDH11-212ENST00000566827 FAAP100Q0VG06 881 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 ITGA7Q13683 1181 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 DSG2Q14126 1118 aa12.34□□□□□ -0.43
CDH11-212ENST00000566827 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms