RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 GDF6Q6KF10 455 aaPredicted RBP29.46■■■□□ 2.31
NME3-209ENST00000566600 SWSAP1Q6NVH7 229 aa29.46■■■□□ 2.31
NME3-209ENST00000566600 B3GNT9Q6UX72 402 aa29.46■■■□□ 2.31
NME3-209ENST00000566600 BRAPQ7Z569 592 aa29.46■■■□□ 2.31
NME3-209ENST00000566600 PPP1R13LQ8WUF5 828 aa29.46■■■□□ 2.31
NME3-209ENST00000566600 CEP290O15078 2479 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 C17orf102A2RUQ5 167 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 ZNF174Q15697 407 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 PRPF38BQ5VTL8 546 aaKnown RBP29.45■■■□□ 2.31
NME3-209ENST00000566600 PDXDC2PQ6P474 469 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 SH3RF1Q7Z6J0 888 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 CCDC60Q8IWA6 550 aaPredicted RBP29.45■■■□□ 2.31
NME3-209ENST00000566600 RNPEPQ9H4A4 650 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 VAV3Q9UKW4 847 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 PCDHA12Q9UN75 941 aa29.45■■■□□ 2.31
NME3-209ENST00000566600 NRCAMQ92823 1304 aa29.45■■■□□ 2.3
NME3-209ENST00000566600 TRIM43BA6NCK2 446 aa29.44■■■□□ 2.3
NME3-209ENST00000566600 RAG1P15918 1043 aa29.44■■■□□ 2.3
NME3-209ENST00000566600 MARK3P27448 753 aa29.44■■■□□ 2.3
NME3-209ENST00000566600 TRIM43Q96BQ3 446 aaPredicted RBP29.44■■■□□ 2.3
NME3-209ENST00000566600 MTMR9Q96QG7 549 aa29.44■■■□□ 2.3
NME3-209ENST00000566600 LBHD1Q9BQE6 289 aaPredicted RBP29.44■■■□□ 2.3
NME3-209ENST00000566600 MAFBQ9Y5Q3 323 aaPredicted RBP29.44■■■□□ 2.3
NME3-209ENST00000566600 HOXC8P31273 242 aa29.43■■■□□ 2.3
NME3-209ENST00000566600 TOB1P50616 345 aaPredicted RBP29.43■■■□□ 2.3
NME3-209ENST00000566600 GABBR1Q9UBS5 961 aa29.43■■■□□ 2.3
NME3-209ENST00000566600 TRPC6Q9Y210 931 aa29.43■■■□□ 2.3
NME3-209ENST00000566600 STX6O43752 255 aa29.42■■■□□ 2.3
NME3-209ENST00000566600 PPFIA1Q13136 1202 aa29.42■■■□□ 2.3
NME3-209ENST00000566600 PLCB4Q15147 1175 aa29.42■■■□□ 2.3
NME3-209ENST00000566600 CCDC155Q8N6L0 562 aa29.42■■■□□ 2.3
NME3-209ENST00000566600 TTC12Q9H892 705 aaPredicted RBP29.42■■■□□ 2.3
NME3-209ENST00000566600 POTEB3A0JP26 581 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 RRN3P2A6NIE6 340 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 TIMP1P01033 207 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 OR52Z1P0C646 297 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 TXKP42681 527 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 POTEBQ6S5H4 581 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 ATP8B4Q8TF62 1192 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 ATP6V0A1Q93050 837 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 FAM167AQ96KS9 214 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 TMEM60Q9H2L4 133 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 HIPK3Q9H422 1215 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 SETD4Q9NVD3 440 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 IGSF9BQ9UPX0 1349 aa29.41■■■□□ 2.3
NME3-209ENST00000566600 LAD1O00515 517 aa29.4■■■□□ 2.3
NME3-209ENST00000566600 HBP1O60381 514 aa29.4■■■□□ 2.3
NME3-209ENST00000566600 CYP2C9P11712 490 aa29.4■■■□□ 2.3
NME3-209ENST00000566600 PTK7Q13308 1070 aa29.4■■■□□ 2.3
NME3-209ENST00000566600 BFSP2Q13515 415 aa29.4■■■□□ 2.3
NME3-209ENST00000566600 CKAP2LQ8IYA6 745 aa29.4■■■□□ 2.3
NME3-209ENST00000566600 BBXQ8WY36 941 aaPredicted RBP29.4■■■□□ 2.3
NME3-209ENST00000566600 NOC4LQ9BVI4 516 aaKnown RBP29.4■■■□□ 2.3
NME3-209ENST00000566600 PCDHB6Q9Y5E3 794 aa29.4■■■□□ 2.3
NME3-209ENST00000566600 MYH9P35579 1960 aaKnown RBP29.39■■■□□ 2.3
NME3-209ENST00000566600 DKC1O60832 514 aaKnown RBP eCLIP29.39■■■□□ 2.3
NME3-209ENST00000566600 SPIRE1Q08AE8 756 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 NBR1Q14596 966 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 EPHA7Q15375 998 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 GRIK4Q16099 956 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 FERMT3Q86UX7 667 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 CAGE1Q8TC20 777 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 LMBR1Q8WVP7 490 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 MTMR6Q9Y217 621 aa29.39■■■□□ 2.3
NME3-209ENST00000566600 KAT6AQ92794 2004 aa29.38■■■□□ 2.29
NME3-209ENST00000566600 INSRRP14616 1297 aa29.38■■■□□ 2.29
NME3-209ENST00000566600 NCAPH2Q6IBW4 605 aa29.38■■■□□ 2.29
NME3-209ENST00000566600 SERINC5Q86VE9 423 aa29.38■■■□□ 2.29
NME3-209ENST00000566600 PPP1R12CQ9BZL4 782 aa29.38■■■□□ 2.29
NME3-209ENST00000566600 ZSCAN16Q9H4T2 348 aaPredicted RBP29.38■■■□□ 2.29
NME3-209ENST00000566600 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.38■■■□□ 2.29
NME3-209ENST00000566600 NRBP2Q9NSY0 501 aa29.38■■■□□ 2.29
NME3-209ENST00000566600 EML1O00423 815 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 PITPNM1O00562 1244 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 ADAM17P78536 824 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 ZNF200P98182 395 aaPredicted RBP29.37■■■□□ 2.29
NME3-209ENST00000566600 PTGDRQ13258 359 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 HIC1Q14526 733 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 TMEM266Q2M3C6 531 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 ZNF484Q5JVG2 852 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 MFSD5Q6N075 450 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 RETREG2Q8NC44 543 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 SPRYD3Q8NCJ5 442 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 CTAGE1Q96RT6 745 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 COL1A2P08123 1366 aa29.37■■■□□ 2.29
NME3-209ENST00000566600 TREHO43280 583 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 P4HBP07237 508 aaKnown RBP29.36■■■□□ 2.29
NME3-209ENST00000566600 ATP4AP20648 1035 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 MAGEA10P43363 369 aaPredicted RBP29.36■■■□□ 2.29
NME3-209ENST00000566600 PSMC5P62195 406 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 TMEM199Q8N511 208 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 C4orf32Q8N8J7 132 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 BADQ92934 168 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 TUBE1Q9UJT0 475 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 CEP131Q9UPN4 1083 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 LTBP2Q14767 1821 aa29.36■■■□□ 2.29
NME3-209ENST00000566600 OATP04181 439 aa29.35■■■□□ 2.29
NME3-209ENST00000566600 ITGB8P26012 769 aa29.35■■■□□ 2.29
NME3-209ENST00000566600 QARSP47897 775 aaKnown RBP29.35■■■□□ 2.29
NME3-209ENST00000566600 IGBP1P78318 339 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms