RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NRXN3Q9Y4C0 1643 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 GLI3P10071 1580 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 RFPL3O75679 317 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 GPR85P60893 370 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 NFKB2Q00653 900 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 CDCA2Q69YH5 1023 aaPredicted RBP5.6□□□□□ -1.51
LINC00561-201ENST00000565815 ABI1Q8IZP0 508 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 SH3RF2Q8TEC5 729 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 DDX1Q92499 740 aaKnown RBP5.6□□□□□ -1.51
LINC00561-201ENST00000565815 ANGEL1Q9UNK9 670 aaKnown RBP5.6□□□□□ -1.51
LINC00561-201ENST00000565815 TELO2Q9Y4R8 837 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 PXDNQ92626 1479 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 KIAA1324LA8MWY0 1029 aaPredicted RBP5.6□□□□□ -1.51
LINC00561-201ENST00000565815 CLSTN1O94985 981 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 AMY2AP04746 511 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 AMY2BP19961 511 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 ZNF792Q3KQV3 632 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 IFNL3Q8IZI9 196 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 NUP43Q8NFH3 380 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 PIP4K2CQ8TBX8 421 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 CCDC140Q96MF4 163 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 MMP19Q99542 508 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 SMURF1Q9HCE7 757 aa5.6□□□□□ -1.51
LINC00561-201ENST00000565815 SBNO1A3KN83 1393 aa5.59□□□□□ -1.51
LINC00561-201ENST00000565815 ARHGEF10O15013 1369 aa5.59□□□□□ -1.51
LINC00561-201ENST00000565815 TBC1D8O95759 1140 aa5.59□□□□□ -1.51
LINC00561-201ENST00000565815 YBX3P16989 372 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC00561-201ENST00000565815 TMPRSS15P98073 1019 aa5.59□□□□□ -1.51
LINC00561-201ENST00000565815 CT47A1Q5JQC4 288 aaPredicted RBP5.59□□□□□ -1.51
LINC00561-201ENST00000565815 SHISA4Q96DD7 197 aa5.59□□□□□ -1.51
LINC00561-201ENST00000565815 GPR101Q96P66 508 aaPredicted RBP5.59□□□□□ -1.51
LINC00561-201ENST00000565815 PCMTD2Q9NV79 361 aa5.59□□□□□ -1.51
LINC00561-201ENST00000565815 MAGEC2Q9UBF1 373 aaPredicted RBP5.59□□□□□ -1.51
LINC00561-201ENST00000565815 RBPJLQ9UBG7 517 aa5.59□□□□□ -1.51
LINC00561-201ENST00000565815 NOP58Q9Y2X3 529 aaKnown RBP5.59□□□□□ -1.51
LINC00561-201ENST00000565815 EYA4O95677 639 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 PRNPP04156 253 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 ADCYAP1R1P41586 468 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 KCNAB2Q13303 367 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 TMEM177Q53S58 311 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 PTRH1Q86Y79 214 aaKnown RBP5.59□□□□□ -1.52
LINC00561-201ENST00000565815 CHAC2Q8WUX2 184 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 TMEM169Q96HH4 297 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 WNK4Q96J92 1243 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 SPTLC3Q9NUV7 552 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 GPR160Q9UJ42 338 aa5.59□□□□□ -1.52
LINC00561-201ENST00000565815 SPATA31A3Q5VYP0 1347 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 FUT4P22083 530 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 THBS2P35442 1172 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 GRIK1P39086 918 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 PAK1Q13153 545 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 ZC3H12BQ5HYM0 836 aaKnown RBP5.58□□□□□ -1.52
LINC00561-201ENST00000565815 ZMYM1Q5SVZ6 1142 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 E4F1Q66K89 784 aaPredicted RBP5.58□□□□□ -1.52
LINC00561-201ENST00000565815 OVCH1Q7RTY7 1134 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 MTA3Q9BTC8 594 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 TIMM13Q9Y5L4 95 aaPredicted RBP5.58□□□□□ -1.52
LINC00561-201ENST00000565815 E9PCH4 1651 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 USP32Q8NFA0 1604 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 AQP7O14520 342 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 ASLP04424 464 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 CREB3L3Q68CJ9 461 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 VSIG10LQ86VR7 867 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 SYNPOQ8N3V7 929 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 SMAD5Q99717 465 aaKnown RBP5.58□□□□□ -1.52
LINC00561-201ENST00000565815 CAAP1Q9H8G2 361 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 SPON1Q9HCB6 807 aa5.58□□□□□ -1.52
LINC00561-201ENST00000565815 BRWD3Q6RI45 1802 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 TESK1Q15569 626 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 KIZQ2M2Z5 673 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 CYP2R1Q6VVX0 501 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 DEFB132Q7Z7B7 95 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 CHTF18Q8WVB6 975 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 CATSPERZQ9NTU4 200 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 THG1LQ9NWX6 298 aaKnown RBP5.57□□□□□ -1.52
LINC00561-201ENST00000565815 PRKAB1Q9Y478 270 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 METP08581 1390 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 DHX57Q6P158 1386 aaKnown RBP5.57□□□□□ -1.52
LINC00561-201ENST00000565815 CCDC163A0A0D9SF12 145 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 PTX3P26022 381 aaPredicted RBP5.57□□□□□ -1.52
LINC00561-201ENST00000565815 DSG1Q02413 1049 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 USP33Q8TEY7 942 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 TRMT2BQ96GJ1 504 aaKnown RBP5.57□□□□□ -1.52
LINC00561-201ENST00000565815 RNF32Q9H0A6 362 aa5.57□□□□□ -1.52
LINC00561-201ENST00000565815 G3BP2Q9UN86 482 aaKnown RBP5.57□□□□□ -1.52
LINC00561-201ENST00000565815 DVL2O14641 736 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 IGHA1P01876 353 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 CDK11BP21127 795 aaKnown RBP5.56□□□□□ -1.52
LINC00561-201ENST00000565815 RPL11P62913 178 aaKnown RBP5.56□□□□□ -1.52
LINC00561-201ENST00000565815 LSAMPQ13449 338 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 MTMR1Q13613 665 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 ALG1Q9BT22 464 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 INTS7Q9NVH2 962 aaKnown RBP5.56□□□□□ -1.52
LINC00561-201ENST00000565815 TAF6LQ9Y6J9 622 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 PTPDC1A2A3K4 754 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 EFCAB14O75071 495 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 ATP2A2P16615 1042 aaKnown RBP5.56□□□□□ -1.52
LINC00561-201ENST00000565815 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
LINC00561-201ENST00000565815 STAT4Q14765 748 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 KRT26Q7Z3Y9 468 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms