RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CCDC171Q6TFL3 1326 aa18.47■□□□□ 0.55
RNF40-205ENST00000563909 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
RNF40-205ENST00000563909 FGRP09769 529 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 TGFB3P10600 412 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 ADAM17P78536 824 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 GPATCH4Q5T3I0 446 aaKnown RBP18.46■□□□□ 0.55
RNF40-205ENST00000563909 ANKRD54Q6NXT1 300 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 SYCE2Q6PIF2 218 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 LMBR1Q8WVP7 490 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 GPKOWQ92917 476 aaPredicted RBP eCLIP18.46■□□□□ 0.55
RNF40-205ENST00000563909 USP26Q9BXU7 913 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 ACACBO00763 2458 aa18.46■□□□□ 0.55
RNF40-205ENST00000563909 KIAA1671Q9BY89 1806 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 TMEM184AQ6ZMB5 413 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 VSIG10LQ86VR7 867 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 CRIPAKQ8N1N5 446 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 FLCNQ8NFG4 579 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 LINC01599Q8WXQ3 324 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
RNF40-205ENST00000563909 TTC14Q96N46 770 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 PDCD2LQ9BRP1 358 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 CHD6Q8TD26 2715 aa18.45■□□□□ 0.54
RNF40-205ENST00000563909 C2CD4DB7Z1M9 353 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 GATMP50440 423 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 ERVFC1P60507 584 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 UBE3AQ05086 875 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 ANGPT1Q15389 498 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 FBXO47Q5MNV8 452 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 LLGL2Q6P1M3 1020 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 RUFY4Q6ZNE9 571 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 RTN4RL1Q86UN2 441 aaPredicted RBP18.44■□□□□ 0.54
RNF40-205ENST00000563909 TRIM50Q86XT4 487 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 NPAS4Q8IUM7 802 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 ADGRF4Q8IZF3 695 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 CDH22Q9UJ99 828 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 PCDHB12Q9Y5F1 795 aa18.44■□□□□ 0.54
RNF40-205ENST00000563909 CFAP47Q6ZTR5 3102 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 LMNAP02545 664 aaKnown RBP18.43■□□□□ 0.54
RNF40-205ENST00000563909 ASGR2P07307 311 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 STAG3L1P0CL83 205 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 CD52P31358 61 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 MGAT3Q09327 533 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 KCNC3Q14003 757 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 QRICH1Q2TAL8 776 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 TAF2Q6P1X5 1199 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 TSHZ1Q6ZSZ6 1077 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 IL31RAQ8NI17 732 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 AGO3Q9H9G7 860 aaKnown RBP18.43■□□□□ 0.54
RNF40-205ENST00000563909 ZNF215Q9UL58 517 aaPredicted RBP18.43■□□□□ 0.54
RNF40-205ENST00000563909 PLXNA4Q9HCM2 1894 aa18.43■□□□□ 0.54
RNF40-205ENST00000563909 MYO10Q9HD67 2058 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 PI15O43692 258 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 HOXB8P17481 243 aaPredicted RBP18.42■□□□□ 0.54
RNF40-205ENST00000563909 HSD17B4P51659 736 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 PGM5Q15124 567 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 SPOUT1Q5T280 376 aaKnown RBP18.42■□□□□ 0.54
RNF40-205ENST00000563909 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
RNF40-205ENST00000563909 VPS53Q5VIR6 699 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 STOX1Q6ZVD7 989 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 RSPH3Q86UC2 560 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 CCDC105Q8IYK2 499 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 VAT1LQ9HCJ6 419 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 CEP250Q9BV73 2442 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 NRCAMQ92823 1304 aa18.42■□□□□ 0.54
RNF40-205ENST00000563909 TRIM6-TRIM34B2RNG4 842 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
RNF40-205ENST00000563909 FGF18O76093 207 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 CWF19L1Q69YN2 538 aaKnown RBP18.41■□□□□ 0.54
RNF40-205ENST00000563909 PDE12Q6L8Q7 609 aaKnown RBP18.41■□□□□ 0.54
RNF40-205ENST00000563909 CYFIP1Q7L576 1253 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 GPR20Q99678 358 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 SEMA4AQ9H3S1 761 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 POMKQ9H5K3 350 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 TMEM260Q9NX78 707 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 CDY2AQ9Y6F7 541 aa18.41■□□□□ 0.54
RNF40-205ENST00000563909 OPLAHO14841 1288 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 ARP10275 920 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 AOC1P19801 751 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 IBSPP21815 317 aaPredicted RBP18.4■□□□□ 0.54
RNF40-205ENST00000563909 CCND2P30279 289 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 HOXA13P31271 388 aaPredicted RBP18.4■□□□□ 0.54
RNF40-205ENST00000563909 TTC22Q5TAA0 569 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 CES5AQ6NT32 575 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 TICAM2Q86XR7 235 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 DTWD2Q8NBA8 298 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 RASGRP4Q8TDF6 673 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 DNAJB3Q8WWF6 145 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 RILPL2Q969X0 211 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 HINFPQ9BQA5 517 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 FTHL17Q9BXU8 183 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 AAASQ9NRG9 546 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 LIMD1Q9UGP4 676 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 LRFN2Q9ULH4 789 aa18.4■□□□□ 0.54
RNF40-205ENST00000563909 FSCN2O14926 492 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 SCG2P13521 617 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 APOBRQ0VD83 1088 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 PLPP4Q5VZY2 271 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 METTL7BQ6UX53 244 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 THNSL1Q8IYQ7 743 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms