RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 GOLGA8AA7E2F4 631 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ZBTB42B2RXF5 422 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 SHISA8B8ZZ34 492 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ZBTB43O43298 467 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 PLA2G6O60733 806 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 PFKFB2O60825 505 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 MMP20O60882 483 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 PLEKHA8P1O95397 391 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 GOLGA8HP0CJ92 632 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 BMP3P12645 472 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 CDC27P30260 824 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 HOXA7P31268 230 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 SLC1A4P43007 532 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 TM4SF4P48230 202 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 EHHADHQ08426 723 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 NOGQ13253 232 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 GRM1Q13255 1194 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ME3Q16798 604 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 CCDC96Q2M329 555 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 CCDC144BQ3MJ40 725 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ELOA3BQ3SY89 546 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 SDE2Q6IQ49 451 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 BTNL9Q6UXG8 535 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 CATSPERGQ6ZRH7 1159 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 TMTC3Q6ZXV5 915 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 KCTD1Q719H9 257 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 FASTKD5Q7L8L6 764 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ANKRD23Q86SG2 305 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 NBPF11Q86T75 865 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 CCDC144CPQ8IYA2 1237 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 SRBD1Q8N5C6 995 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 FANCBQ8NB91 859 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 TTC16Q8NEE8 873 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ELOA3Q8NG57 546 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 NUP133Q8WUM0 1156 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 SNX21Q969T3 373 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 BTBD6Q96KE9 485 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 UBE2OQ9C0C9 1292 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 CPVLQ9H3G5 476 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 IGFLR1Q9H665 355 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 RPAP3Q9H6T3 665 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 NCOA5Q9HCD5 579 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 TMOD4Q9NZQ9 345 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 LIMCH1Q9UPQ0 1083 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 SLC12A7Q9Y666 1083 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 LOC285556D6RIA3 1793 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 CNTNAP5Q8WYK1 1306 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ADGRA2Q96PE1 1338 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 MYH8P13535 1937 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 TMEM232C9JQI7 657 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 KLRF2D3W0D1 207 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 PDHXO00330 501 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 CYTH3O43739 400 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 DTNBO60941 627 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 CTDNEP1O95476 244 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 PARP1P09874 1014 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 CALM1P0DP23 149 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 CALM2P0DP24 149 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 CALM3P0DP25 149 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ALAS2P22557 587 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 SLC16A2P36021 539 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 MCM2P49736 904 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 METAP2P50579 478 aaKnown RBP eCLIP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 PLCB3Q01970 1234 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 SCRN1Q12765 414 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 SREBF2Q12772 1141 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 STK3Q13188 491 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 CUL4AQ13619 759 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 NTRK3Q16288 839 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ASPRV1Q53RT3 343 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 GPATCH4Q5T3I0 446 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 SYDE2Q5VT97 1194 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 TTC39BQ5VTQ0 682 aaPredicted RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 SYNE3Q6ZMZ3 975 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ZNF438Q7Z4V0 828 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 DNAJC5GQ8N7S2 189 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 NECAB1Q8N987 351 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 REPS2Q8NFH8 660 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 DHX38Q92620 1227 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 GTF3C6Q969F1 213 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ATG4CQ96DT6 458 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 MTMR8Q96EF0 704 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 TMX3Q96JJ7 454 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 FAM129BQ96TA1 746 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 P2RX7Q99572 595 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 SPZ1Q9BXG8 430 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 BRINP2Q9C0B6 783 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 UBA5Q9GZZ9 404 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ASCC2Q9H1I8 757 aaPredicted RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 RIOX1Q9H6W3 641 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 CAPN10Q9HC96 672 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ZCCHC17Q9NP64 241 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ENAMQ9NRM1 1142 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 DNAJB12Q9NXW2 375 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 FEM1BQ9UK73 627 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 PPP1R9AQ9ULJ8 1098 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 ADAMTS5Q9UNA0 930 aa6.02□□□□□ -1.45
HERPUD1-207ENST00000563781 SLC45A1Q9Y2W3 748 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms